RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 OR7D4Q8NG98 312 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 GIPC3Q8TF64 312 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 AGAP2Q99490 1192 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 KIFC1Q9BW19 673 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 IL22Q9GZX6 179 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SLC25A51Q9H1U9 297 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 ATP13A1Q9HD20 1204 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 DCTN4Q9UJW0 460 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 GPC6Q9Y625 555 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 LPXNO60711 386 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 KRT37O76014 449 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 ALDOAP04075 364 aaKnown RBP13.1□□□□□ -0.31
CPNE1-201ENST00000317677 COL6A2P12110 1019 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 GLDCP23378 1020 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
CPNE1-201ENST00000317677 CDK9P50750 372 aaKnown RBP13.1□□□□□ -0.31
CPNE1-201ENST00000317677 WNT3AP56704 352 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 NUP107P57740 925 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 YBEYP58557 167 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-201ENST00000317677 VEPH1Q14D04 833 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 TIFABQ6ZNK6 161 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 KDELC2Q7Z4H8 507 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 LINC00523Q86TU6 105 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 TMC8Q8IU68 726 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 GPR65Q8IYL9 337 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 ICA1LQ8NDH6 482 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 NSMCE3Q96MG7 304 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 MCMBPQ9BTE3 642 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 MANSC1Q9H8J5 431 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 RAB26Q9ULW5 256 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
CPNE1-201ENST00000317677 A0A0G2JND7 137 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 FUOMA2VDF0 154 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 CCDC160A6NGH7 325 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 OLFM2O95897 454 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 GMPRP36959 345 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ETFBP38117 255 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 SLC11A2P49281 568 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TMED10P49755 219 aaKnown RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 SERPINB9P50453 376 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 RENBPP51606 427 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 EPHB3P54753 998 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 NAA20P61599 178 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TAF12Q16514 161 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 PCSK7Q16549 785 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 MARC1Q5VT66 337 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TXNDC8Q6A555 127 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 FBXL19Q6PCT2 694 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 POTEHQ6S545 545 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 RNF111Q6ZNA4 994 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 GUCD1Q96NT3 240 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 FAM111AQ96PZ2 611 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TAGLN3Q9UI15 199 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 GBF1Q92538 1859 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 GOLGA8TH3BQL2 631 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TSPAN3O60637 253 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ADAM23O75077 832 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 DNAJB1P25685 340 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ARNTP27540 789 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 CD86P42081 329 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 CDH4P55283 916 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ERVFC1P60507 584 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 CYP4F8P98187 520 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 GNA12Q03113 381 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 PDAP1Q13442 181 aaKnown RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 NAB1Q13506 487 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 POU6F1Q14863 301 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 OGFRL1Q5TC84 451 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ARL14EPQ8N8R7 260 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 NEURL2Q9BR09 285 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 HGH1Q9BTY7 390 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 FBXO6Q9NRD1 293 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 SLC2A6Q9UGQ3 507 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 RSL24D1Q9UHA3 163 aaKnown RBP13.09□□□□□ -0.31
CPNE1-201ENST00000317677 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
CPNE1-201ENST00000317677 COQ6Q9Y2Z9 468 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms