RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SPCS2Q15005 226 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 FSTL4Q6MZW2 842 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZYG11AQ6WRX3 759 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 STRA8Q7Z7C7 330 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 MIB1Q86YT6 1006 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PSTKQ8IV42 348 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 USP33Q8TEY7 942 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 TOP1MTQ969P6 601 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 CELF6Q96J87 481 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF597Q96LX8 424 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 GIN1Q9NXP7 522 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PACSIN3Q9UKS6 424 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 GOLGA8QA0A0J9YX86 632 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 GOLGA8OA6NCC3 632 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 GOLGA8NF8WBI6 632 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 TRIM38O00635 465 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 TIMM44O43615 452 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 COL6A2P12110 1019 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 CD1EP15812 388 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 MPSTP25325 297 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 DNAJB1P25685 340 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 PCSK6P29122 969 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 CSRP3P50461 194 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 TPI1P60174 286 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 RPS3AP61247 264 aaKnown RBP10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 NSUN2Q08J23 767 aaKnown RBP eCLIP10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 TAF10Q12962 218 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 LIPMQ5VYY2 423 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 POTEHQ6S545 545 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 TMEM135Q86UB9 458 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 TSPAN14Q8NG11 270 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 IGSF21Q96ID5 467 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 OLFM1Q99784 485 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 MCMBPQ9BTE3 642 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 OSBPL11Q9BXB4 747 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 WDR55Q9H6Y2 383 aaPredicted RBP10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZBTB26Q9HCK0 441 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ABCC13Q9NSE7 274 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 SELENONQ9NZV5 590 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 SZT2Q5T011 3432 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 XIRP2A4UGR9 3374 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZBBXA8MT70 800 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 FAM47E-STBD1D6RA91 191 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 KCNK1O00180 336 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 NDUFB5O43674 189 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ADAM23O75077 832 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 RNASEH2AO75792 299 aaKnown RBP10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 LRIG2O94898 1065 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 C2P06681 752 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 C8BP07358 591 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 PSMB4P28070 264 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 CA8P35219 290 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 GMPRP36959 345 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 DPP6P42658 865 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 CXCR3P49682 368 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 EFEMP1Q12805 493 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 GPR17Q13304 367 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ART3Q13508 389 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ARL13BQ3SXY8 428 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 AMIGO2Q86SJ2 522 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 GALNT4Q8N4A0 578 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 NPWQ8N729 165 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 FBXO32Q969P5 355 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 ARMC5Q96C12 935 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 DUS3LQ96G46 650 aaKnown RBP10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 P2RY11Q96G91 374 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 NSMCE3Q96MG7 304 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 KLHL32Q96NJ5 620 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 HEPHQ9BQS7 1158 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 NEURL2Q9BR09 285 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 PIH1D1Q9NWS0 290 aaKnown RBP10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 RRN3Q9NYV6 651 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 HACD3Q9P035 362 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 EPS15L1Q9UBC2 864 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 CDYLQ9Y232 598 aa10.35□□□□□ -0.75
APOBEC3F-201ENST00000308521 CHD9Q3L8U1 2897 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 TIMP1P01033 207 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ENO3P13929 434 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 TFEBP19484 476 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PKNOX1P55347 436 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PPP2R5DQ14738 602 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PDK1Q15118 436 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF829Q3KNS6 432 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 C1orf53Q5VUE5 145 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 IRAK1BP1Q5VVH5 260 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CARM1Q86X55 608 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 NACC2Q96BF6 587 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ASB9Q96DX5 294 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 FUBP3Q96I24 572 aaKnown RBP eCLIP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ATAD3AQ9NVI7 634 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 SUCOQ9UBS9 1254 aaKnown RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 RNF11Q9Y3C5 154 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZCWPW2A0A1B0GU75 182 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 OR6C75A6NL08 312 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CFLARO15519 480 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 IRAK2O43187 625 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms