RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SEMA4FO95754 770 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3HP0C7X1 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 ZNF30P17039 623 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 OXTRP30559 389 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 PPP2CBP62714 309 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 PPP2CAP67775 309 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3GQ6DHY5 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3CQ6IPX1 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 CENPUQ71F23 418 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 HSD11B1LQ7Z5J1 315 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 IGDCC3Q8IVU1 814 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3Q8IZP1 549 aaPredicted RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 PPHLN1Q8NEY8 458 aaKnown RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 ZNF778Q96MU6 729 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 FBXO4Q9UKT5 387 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 ZFR2Q9UPR6 939 aaKnown RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 COQ6Q9Y2Z9 468 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 MAD1L1Q9Y6D9 718 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 CCDC163A0A0D9SF12 145 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 HEATR9A2RTY3 570 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 H0Y858 1186 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 CRTAMO95727 393 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 C6P13671 934 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 ADRA1DP25100 572 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 STC1P52823 247 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 PCID2Q5JVF3 399 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 TMC3Q7Z5M5 1100 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 PARD6BQ9BYG5 372 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 SAYSD1Q9NPB0 183 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 MBD1Q9UIS9 605 aaPredicted RBP27.14■■□□□ 1.94
HDAC3-201ENST00000305264 CHMP2BQ9UQN3 213 aa27.14■■□□□ 1.94
HDAC3-201ENST00000305264 MROH6A6NGR9 719 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 GM2AP17900 193 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 HMGCLP35914 325 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 ELK3P41970 407 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 ZNF140P52738 457 aaPredicted RBP27.13■■□□□ 1.93
HDAC3-201ENST00000305264 WDR93Q6P2C0 686 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 RFLNAQ6ZTI6 216 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 WDR5BQ86VZ2 330 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 ANKMY2Q8IV38 441 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 OR2T34Q8NGX1 318 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 FOXP3Q9BZS1 431 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 KDM4CQ9H3R0 1056 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 BPIFA1Q9NP55 256 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 TEX264Q9Y6I9 313 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 USP34Q70CQ2 3546 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 RNGTTO60942 597 aaKnown RBP27.13■■□□□ 1.93
HDAC3-201ENST00000305264 USP39Q53GS9 565 aaKnown RBP27.13■■□□□ 1.93
HDAC3-201ENST00000305264 ZBED8Q8IZ13 594 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 CBARPQ8N350 705 aaPredicted RBP27.13■■□□□ 1.93
HDAC3-201ENST00000305264 MYRIPQ8NFW9 859 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 OR13C4Q8NGS5 318 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 STAMBPL1Q96FJ0 436 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 GPR174Q9BXC1 333 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 C6orf106Q9H6K1 298 aaPredicted RBP27.13■■□□□ 1.93
HDAC3-201ENST00000305264 SAMD15Q9P1V8 674 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 SOX13Q9UN79 622 aa27.13■■□□□ 1.93
HDAC3-201ENST00000305264 ZNF106Q9H2Y7 1883 aaKnown RBP27.12■■□□□ 1.93
HDAC3-201ENST00000305264 A0A1W2PQU0 124 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 IGLON5A6NGN9 336 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 LRRC72A6NJI9 287 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 C2orf81A6NN90 581 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 FAM153BP0C7A2 387 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 CBLBQ13191 982 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 FAM153CQ494X1 144 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 CES3Q6UWW8 571 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 CCNI2Q6ZMN8 369 aaPredicted RBP27.12■■□□□ 1.93
HDAC3-201ENST00000305264 LONP2Q86WA8 852 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 EIF1ADQ8N9N8 165 aaKnown RBP27.12■■□□□ 1.93
HDAC3-201ENST00000305264 OR4K2Q8NGD2 314 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 DNAJC1Q96KC8 554 aaKnown RBP27.12■■□□□ 1.93
HDAC3-201ENST00000305264 SPACA7Q96KW9 195 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 KIFC1Q9BW19 673 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 PHACTR1Q9C0D0 580 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 IL17CQ9P0M4 197 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 SLC2A6Q9UGQ3 507 aa27.12■■□□□ 1.93
HDAC3-201ENST00000305264 LPOP22079 712 aaPredicted RBP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 ETV3P41162 512 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 ACOX1Q15067 660 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 ANGPT1Q15389 498 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 TMEM259Q4ZIN3 620 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 KIAA1161Q6NSJ0 714 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 EBNA1BP2Q99848 306 aaKnown RBP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 PSMD11O00231 422 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 CCL22O00626 93 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 EIF3HO15372 352 aaKnown RBP eCLIP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 CTIFO43310 598 aaKnown RBP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 BCKDHBP21953 392 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 MAT2AP31153 395 aaKnown RBP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 RPS21P63220 83 aaKnown RBP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 TSTD2Q5T7W7 516 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 Q6ZVL8 140 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 MICALCLQ6ZW33 695 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 HORMAD1Q86X24 394 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 FBXO36Q8NEA4 188 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 PTCD2Q8WV60 388 aaKnown RBP27.11■■□□□ 1.93
HDAC3-201ENST00000305264 KLK6Q92876 244 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 LRRC39Q96DD0 335 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 COQ10AQ96MF6 247 aa27.11■■□□□ 1.93
HDAC3-201ENST00000305264 PLXNA2O75051 1894 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms