RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
CCDC7-202ENST00000302316 PKP3Q9Y446 797 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 BRWD1Q9NSI6 2320 aa13.01□□□□□ -0.33
CCDC7-202ENST00000302316 MUC22E2RYF6 1773 aaPredicted RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 A0A1W2PQ67 120 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 ANHXE9PGG2 379 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 KAT7O95251 611 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 LSP1P33241 339 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 HMGCLP35914 325 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 HADHAP40939 763 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SOX9P48436 509 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SLC18A1P54219 525 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 ZNF234Q14588 700 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 CCDC85BQ15834 202 aaPredicted RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 MRNIPQ6NTE8 343 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 CMC1Q7Z7K0 106 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 KDM1BQ8NB78 822 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 GDAP1Q8TB36 358 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 TCP10LQ8TDR4 215 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 ACMSDQ8TDX5 336 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SPOCK2Q92563 424 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 CENPTQ96BT3 561 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 GPR22Q99680 433 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 PAIP2Q9BPZ3 127 aaKnown RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 SLC13A1Q9BZW2 595 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 ZFYVE1Q9HBF4 777 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SNX15Q9NRS6 342 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 MARCH4Q9P2E8 410 aaPredicted RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 FKBPLQ9UIM3 349 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 FNDC3AQ9Y2H6 1198 aaKnown RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 SPTBN5Q9NRC6 3674 aaKnown RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 TM9SF1O15321 606 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 CD3EAPO15446 510 aaKnown RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 APODP05090 189 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 HLA-EP13747 358 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 PSMA3P25788 255 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 TYK2P29597 1187 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 GRIA2P42262 883 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 ARSIQ5FYB1 569 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SERPINA13PQ6UXR4 307 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 LDB1Q86U70 411 aaPredicted RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 ISL2Q96A47 359 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 UBE2ZQ9H832 354 aaPredicted RBP13□□□□□ -0.33
CCDC7-202ENST00000302316 CAB39LQ9H9S4 337 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 IL17CQ9P0M4 197 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 SLC39A10Q9ULF5 831 aa13□□□□□ -0.33
CCDC7-202ENST00000302316 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 EDDM13A0A1B0GTR0 161 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 NPIPB15A6NHN6 443 aaPredicted RBP12.99□□□□□ -0.33
CCDC7-202ENST00000302316 A8MX80 341 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 C2CD4DB7Z1M9 353 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 HAUS5O94927 633 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 CTSLP07711 333 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 SAT1P21673 171 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 MC4RP32245 332 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 LEPRP48357 1165 aaKnown RBP12.99□□□□□ -0.33
CCDC7-202ENST00000302316 NEK3P51956 506 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 POLR2LP62875 67 aaKnown RBP12.99□□□□□ -0.33
CCDC7-202ENST00000302316 SMAD4Q13485 552 aaKnown RBP12.99□□□□□ -0.33
CCDC7-202ENST00000302316 AAK1Q2M2I8 961 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 HNRNPA1L2Q32P51 320 aaKnown RBP12.99□□□□□ -0.33
CCDC7-202ENST00000302316 FASTKD1Q53R41 847 aaKnown RBP12.99□□□□□ -0.33
CCDC7-202ENST00000302316 BRAT1Q6PJG6 821 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 NUDT18Q6ZVK8 323 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 GALNT7Q86SF2 657 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 PNPLA1Q8N8W4 532 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 GPATCH11Q8N954 259 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 ACVR1CQ8NER5 493 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 GPR150Q8NGU9 434 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 DENND1AQ8TEH3 1009 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 SCRN2Q96FV2 425 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 LYSMD1Q96S90 227 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 MKS1Q9NXB0 559 aa12.99□□□□□ -0.33
CCDC7-202ENST00000302316 FAM95CA0A1B0GW59 222 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 CLDN7O95471 211 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 OGNP20774 298 aaKnown RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 MAGEA12P43365 314 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 SEMG2Q02383 582 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 ZNF789Q5FWF6 425 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 LRRC73Q5JTD7 316 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 HHATQ5VTY9 493 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 CNSTQ6PJW8 725 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 LVRNQ6Q4G3 990 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 CDHR3Q6ZTQ4 885 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 TPRG1Q6ZUI0 275 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 SDCCAG8Q86SQ7 713 aaPredicted RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 TSPAN33Q86UF1 283 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 EID2BQ96D98 161 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 LRIG1Q96JA1 1093 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 MCCC1Q96RQ3 725 aaPredicted RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 C12orf65Q9H3J6 166 aaKnown RBP12.98□□□□□ -0.33
CCDC7-202ENST00000302316 SLC17A7Q9P2U7 560 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 PPIL1Q9Y3C6 166 aa12.98□□□□□ -0.33
CCDC7-202ENST00000302316 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms