RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 DEFB115Q30KQ5 88 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CMPK2Q5EBM0 449 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 LDLRAP1Q5SW96 308 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 FAM219BQ5XKK7 198 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 FAR2Q96K12 515 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 KCNA7Q96RP8 456 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 SOX17Q9H6I2 414 aaPredicted RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 MARCH2Q9P0N8 246 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 IGSF9Q9P2J2 1179 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 LIMD1Q9UGP4 676 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 TDRKHQ9Y2W6 561 aaKnown RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 DHRS12A0PJE2 317 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 ZNF682O95780 498 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 SLC5A3P53794 718 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 OCA2Q04671 838 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 DCTN2Q13561 401 aaKnown RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 FAM110CQ1W6H9 321 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 EPGNQ6UW88 154 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 IL27RAQ6UWB1 636 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CEP97Q8IW35 865 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 ATP6V0D2Q8N8Y2 350 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CLHC1Q8NHS4 586 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 ARNTL2Q8WYA1 636 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 GFM2Q969S9 779 aaKnown RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 NSMCE2Q96MF7 247 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 SMOQ99835 787 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 ZSWIM8A7E2V4 1837 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 LRRC14BA6NHZ5 514 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CCDC154A6NI56 674 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 SLC10A3P09131 477 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 RPL10P27635 214 aaKnown RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 HOXA11P31270 313 aaPredicted RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 MS4A2Q01362 244 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CHRNB3Q05901 458 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 MAPK11Q15759 364 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 GLT6D1Q7Z4J2 308 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 SLC22A9Q8IVM8 553 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 DHRSXQ8N5I4 330 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 TRIM62Q9BVG3 475 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CRTAC1Q9NQ79 661 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 MTMR10Q9NXD2 777 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 RRN3Q9NYV6 651 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CNTN3Q9P232 1028 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 TRIM43BA6NCK2 446 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 F5H5T6 163 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 J3KR12 359 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 SNNO75324 88 aaPredicted RBP14.06□□□□□ -0.16
SDC2-201ENST00000302190 HLA-DQB2P05538 268 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ATP5BP06576 529 aaKnown RBP14.06□□□□□ -0.16
SDC2-201ENST00000302190 PROZP22891 400 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 PBX3P40426 434 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 SLC10A7Q0GE19 358 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ARHGEF7Q14155 803 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ZNF792Q3KQV3 632 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 METTL21CQ5VZV1 264 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 NCCRP1Q6ZVX7 275 aaPredicted RBP14.06□□□□□ -0.16
SDC2-201ENST00000302190 ZNF534Q76KX8 674 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 CRYBG2Q8N1P7 616 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 TXNDC5Q8NBS9 432 aaKnown RBP14.06□□□□□ -0.16
SDC2-201ENST00000302190 NPY6RQ99463 290 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 C16orf70Q9BSU1 422 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 TBC1D23Q9NUY8 699 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 WWOXQ9NZC7 414 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 IGKV6-21A0A0C4DH24 114 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 SMIM31A0A1B0GVY4 71 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 C2orf81A6NN90 581 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 CAPN14A8MX76 684 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 GPR182O15218 404 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 VPS26AO75436 327 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 LDLRP01130 860 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ASLP04424 464 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 GLUD2P49448 558 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ADGRE1Q14246 886 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 REP15Q6BDI9 236 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 TAPT1Q6NXT6 567 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.06□□□□□ -0.16
SDC2-201ENST00000302190 OR13C4Q8NGS5 318 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 SORT1Q99523 831 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ABCC13Q9NSE7 274 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 TAS2R13Q9NYV9 303 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 KIF17Q9P2E2 1029 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 MATN2O00339 956 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 FAM189A1O60320 539 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 NR1H2P55055 460 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 TRIM25Q14258 630 aaKnown RBP14.06□□□□□ -0.16
SDC2-201ENST00000302190 C19orf60Q96EN9 201 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 TMEM209Q96SK2 561 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 MLPHQ9BV36 600 aaPredicted RBP14.06□□□□□ -0.16
SDC2-201ENST00000302190 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 ATP13A1Q9HD20 1204 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 RAD54BQ9Y620 910 aa14.06□□□□□ -0.16
SDC2-201ENST00000302190 EYSQ5T1H1 3165 aa14.05□□□□□ -0.16
SDC2-201ENST00000302190 MANSC4A6NHS7 340 aaPredicted RBP14.05□□□□□ -0.16
SDC2-201ENST00000302190 AZIN1O14977 448 aa14.05□□□□□ -0.16
SDC2-201ENST00000302190 SPATA31D3P0C874 917 aa14.05□□□□□ -0.16
SDC2-201ENST00000302190 LBPP18428 481 aa14.05□□□□□ -0.16
SDC2-201ENST00000302190 HARS2P49590 506 aaKnown RBP14.05□□□□□ -0.16
SDC2-201ENST00000302190 FLT3LGP49771 235 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms