RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 GOT2P00505 430 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 HSPA1AP0DMV8 641 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 HSPA1BP0DMV9 641 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 SCNN1BP51168 640 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 NDST2P52849 883 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 NRF1Q16656 503 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 CLLU1OSQ5K130 101 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 LRRC49Q8IUZ0 686 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 TSPAN17Q96FV3 270 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 NSUN5Q96P11 429 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 RBM38Q9H0Z9 239 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 IL1RL2Q9HB29 575 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 TMEM248Q9NWD8 314 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 PRSS51A0A1B0GVH4 220 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 SLC12A8A0AV02 714 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 TRIM38O00635 465 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 SLC7A4O43246 635 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 ADAMTS4O75173 837 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 TMCC1O94876 653 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 OR1E1P30953 314 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 FLT3LGP49771 235 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 SH3BP2P78314 561 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 LRP8Q14114 963 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 RFTN1Q14699 578 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 UNC50Q53HI1 259 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 ZFP1Q6P2D0 407 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 IYDQ6PHW0 289 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 MARVELD2Q8N4S9 558 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 FBXO32Q969P5 355 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 UROC1Q96N76 676 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 MFSD1Q9H3U5 465 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 DNAAF2Q9NVR5 837 aaKnown RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 MARCH2Q9P0N8 246 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 CCDC162PA2VCL2 907 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 MANSC4A6NHS7 340 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 UBXN8O00124 270 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 RAMP2O60895 175 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 IMPDH1P20839 514 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 FOXA1P55317 472 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 NRG1Q02297 640 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 TAF10Q12962 218 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 SQLEQ14534 574 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 NADK2Q4G0N4 442 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 ZNF678Q5SXM1 525 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 KLHDC10Q6PID8 442 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 CCDC126Q96EE4 140 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 LRCH3Q96II8 777 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 KCNA7Q96RP8 456 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 NDUFA13Q9P0J0 144 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 DOCK4Q8N1I0 1966 aa12.91□□□□□ -0.34
HIF3A-204ENST00000300862 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
HIF3A-204ENST00000300862 A0A0D9SEW6 157 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 H3BMM5 538 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 MRASO14807 208 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 SNRPB2P08579 225 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 ALDOCP09972 364 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 SLC2A3P11169 496 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 ATP6V1B1P15313 513 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 HPCAP84074 193 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 TIAL1Q01085 375 aaKnown RBP eCLIP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 STX5Q13190 355 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 TRIM25Q14258 630 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 OR4D1Q15615 310 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 PFKFB4Q16877 469 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 PTGR2Q8N8N7 351 aaPredicted RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 PIP4K2CQ8TBX8 421 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 FAM110BQ8TC76 370 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 RANBP9Q96S59 729 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 CRISPLD1Q9H336 500 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 HCSTQ9UBK5 93 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 A0A1B0GTL3 188 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 SEPT4O43236 478 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 DENRO43583 198 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 OAZ2O95190 189 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 RPL5P46777 297 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 SLC14A2Q15849 920 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 CTXN3Q4LDR2 81 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 AMIGO2Q86SJ2 522 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 TICAM1Q8IUC6 712 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 AFAP1L2Q8N4X5 818 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 ATP6V0D2Q8N8Y2 350 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 TMEM102Q8N9M5 508 aaPredicted RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 LRTOMTQ8WZ04 291 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms