RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PAQR3Q6TCH7 311 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 FRA10AC1Q70Z53 315 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 TSPAN17Q96FV3 270 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 C8orf48Q96LL4 319 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 NSUN5Q96P11 429 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 PKMYT1Q99640 499 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CORO1BQ9BR76 489 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 UPF3AQ9H1J1 476 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF106Q9H2Y7 1883 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ZMYM5Q9UJ78 669 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 AURKCQ9UQB9 309 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 SH3BP1Q9Y3L3 701 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ANGPTL3Q9Y5C1 460 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 RAI2Q9Y5P3 530 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 NR5A2O00482 541 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 UBDO15205 165 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 NIPSNAP2O75323 286 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 RPLP2P05387 115 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 RAG1P15918 1043 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ATP5F1P24539 256 aaPredicted RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ARNTP27540 789 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ZYG11AQ6WRX3 759 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 EP400NLQ6ZTU2 488 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 DNAJB7Q7Z6W7 309 aaPredicted RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CUZD1Q86UP6 607 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 MFN1Q8IWA4 741 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ENDOVQ8N8Q3 282 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 ICA1LQ8NDH6 482 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 UCMAQ8WVF2 138 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 CASD1Q96PB1 797 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 TSGA13Q96PP4 275 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 GPR21Q99679 349 aa9.32□□□□□ -0.92
PRDM9-201ENST00000296682 OLA1Q9NTK5 396 aaKnown RBP9.32□□□□□ -0.92
PRDM9-201ENST00000296682 KLKB1P03952 638 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 THRAP10827 490 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 UGT1A6P19224 532 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 UGT1A1P22309 533 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 UGT1A4P22310 534 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 MC4RP32245 332 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 UGT1A3P35503 534 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 UGT1A5P35504 534 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 KCNC1P48547 511 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 VEGFBP49765 207 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 TNK2Q07912 1038 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 ELAVL2Q12926 359 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 SERINC3Q13530 473 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 TSNQ15631 228 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 TRIM71Q2Q1W2 868 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 DET1Q7L5Y6 550 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 KYQ8NBH2 561 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 IMP4Q96G21 291 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 LRGUKQ96M69 825 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 MYCBPQ99417 103 aaPredicted RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 MRPL57Q9BQC6 102 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 C1orf50Q9BV19 199 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 CCDC106Q9BWC9 280 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 MRPL1Q9BYD6 325 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 MARCH5Q9NX47 278 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 NEU3Q9UQ49 428 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 CPQQ9Y646 472 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 ANKRD36A6QL64 1941 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 TM7SF2O76062 418 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 APOA4P06727 396 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 ALOX15P16050 662 aaPredicted RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF135P52742 658 aaPredicted RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 IHHQ14623 411 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 KRT72Q14CN4 511 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 LHX8Q68G74 356 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 CCSAPQ6IQ19 270 aaPredicted RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 FATE1Q969F0 183 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 COPS7BQ9H9Q2 264 aaPredicted RBP9.31□□□□□ -0.92
PRDM9-201ENST00000296682 SPO11Q9Y5K1 396 aa9.31□□□□□ -0.92
PRDM9-201ENST00000296682 BAIAP3O94812 1187 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 IPO13O94829 963 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CRTAMO95727 393 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ANPEPP15144 967 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 POU4F1Q01851 419 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ARHGEF6Q15052 776 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 TCTN1Q2MV58 587 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 MSANTD2Q6P1R3 559 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 SIDT2Q8NBJ9 832 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CEP70Q8NHQ1 597 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 GRIN3AQ8TCU5 1115 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 DIS3LQ8TF46 1054 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 MTFMTQ96DP5 389 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CDKN2AIPNLQ96HQ2 116 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 GCNAQ96QF7 691 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 PCDHAC1Q9H158 963 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 PKP3Q9Y446 797 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 A0A1W2PRU2 124 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ENO4A6NNW6 628 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 A8MT66 165 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CDC7O00311 574 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 PEX1O43933 1283 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 IGLV3-25P01717 112 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 RBP1P09455 135 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms