RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 EME1Q96AY2 570 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 GPR78Q96P69 363 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 TBL1YQ9BQ87 522 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 NOL11Q9H8H0 719 aaKnown RBP13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 VCX3AQ9NNX9 186 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 PSMD13Q9UNM6 376 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 PRORSD1PA6NEY8 169 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 TMX2-CTNND1H3BSU7 103 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 SDHDO14521 159 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 ACSL4O60488 711 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 CLPTM1O96005 669 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 MPOP05164 745 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 RAB10P61026 200 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 PLIN5Q00G26 463 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 ANKDD1AQ495B1 522 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 GPR158Q5T848 1215 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 ATPAF2Q8N5M1 289 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 SCAIQ8N9R8 606 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 COQ10BQ9H8M1 238 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 RIMS3Q9UJD0 308 aa13.31□□□□□ -0.28
KCNIP3-201ENST00000295225 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 UBFD1O14562 309 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 PAGE1O75459 146 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 SUPT7LO94864 414 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 INMTO95050 263 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 RPL34P49207 117 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ARSDP51689 593 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 SLC12A1Q13621 1099 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 KYAT1Q16773 422 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 CEP78Q5JTW2 689 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 OGFRL1Q5TC84 451 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 METTL11BQ5VVY1 283 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ZNF600Q6ZNG1 722 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ZFP28Q8NHY6 868 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 FCRL2Q96LA5 508 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 NSUN5Q96P11 429 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 PTPN18Q99952 460 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 SOX17Q9H6I2 414 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ZBTB26Q9HCK0 441 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 NT5MQ9NPB1 228 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 MARCH4Q9P2E8 410 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 NCF1BA6NI72 391 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 NCF1CA8MVU1 366 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 FBP2O00757 339 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 VILLO15195 856 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 HNRNPRO43390 633 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 NCF1P14598 390 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 PSMC3P17980 439 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ME2P23368 584 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 MAPK10P53779 464 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 SLC12A2P55011 1212 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 FOXA1P55317 472 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 GALNT2Q10471 571 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ANKRD39Q53RE8 183 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 STYXQ8WUJ0 223 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 PDCD6IPQ8WUM4 868 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 CAAP1Q9H8G2 361 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 ST3GAL5Q9UNP4 418 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 AURKCQ9UQB9 309 aa13.3□□□□□ -0.28
KCNIP3-201ENST00000295225 SAC3D1A6NKF1 404 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 HHLA1C9JL84 531 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 HAT1O14929 419 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 BLVRAP53004 296 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 USP46P62068 366 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 ADGRE1Q14246 886 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 GNA13Q14344 377 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 PRPSAP1Q14558 356 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 KLHDC10Q6PID8 442 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 TMEM207Q6UWW9 146 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 ARHGAP12Q8IWW6 846 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 OR10T2Q8NGX3 314 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 LPGAT1Q92604 370 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 HDAC11Q96DB2 347 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 HBEGFQ99075 208 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 RTP3Q9BQQ7 232 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 FBXO5Q9UKT4 447 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 BTRCQ9Y297 605 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 ARL5CA6NH57 179 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 TARM1B6A8C7 271 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 CNTN5O94779 1100 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 GNAO1P09471 354 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 CD86P42081 329 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 CASP2P42575 452 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 ARCN1P48444 511 aaKnown RBP13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 CD83Q01151 205 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 DSC2Q02487 901 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 NAPEPLDQ6IQ20 393 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
KCNIP3-201ENST00000295225 MRPL1Q9BYD6 325 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms