RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PQLC3Q8N755 202 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 ARL10Q8N8L6 244 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 PIH1D2Q8WWB5 315 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MAML1Q92585 1016 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 FGF11Q92914 225 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 FAF2Q96CS3 445 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 NUS1Q96E22 293 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 SCRN2Q96FV2 425 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 TSGA13Q96PP4 275 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MCCC1Q96RQ3 725 aaPredicted RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 RBM15Q96T37 977 aaKnown RBP eCLIP10.48□□□□□ -0.731e-7■■■□□ 16.3
SNF8-201ENST00000290330 CHP1Q99653 195 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 SEMA3CQ99985 751 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 DEF6Q9H4E7 631 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 WDR26Q9H7D7 661 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 NT5MQ9NPB1 228 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MRPL40Q9NQ50 206 aaKnown RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 ABHD10Q9NUJ1 306 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 ZNHIT6Q9NWK9 470 aaKnown RBP10.48□□□□□ -0.73
SNF8-201ENST00000290330 GULP1Q9UBP9 304 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 LCMT1Q9UIC8 334 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 PYCARDQ9ULZ3 195 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 PPIL1Q9Y3C6 166 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 ADAMTS20P59510 1910 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 MYLKQ15746 1914 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 LRRK1Q38SD2 2015 aa10.48□□□□□ -0.73
SNF8-201ENST00000290330 PSMD11O00231 422 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 PDE2AO00408 941 aaPredicted RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ZSCAN12O43309 604 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 FZD6O60353 706 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 TCEA3O75764 348 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 PDHA1P08559 390 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 CYP2A6P11509 494 aaPredicted RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 HOXB3P14651 431 aaPredicted RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 CCNCP24863 283 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 NFKBIAP25963 317 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ITPKBP27987 946 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 MAN1A1P33908 653 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ACTN2P35609 894 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ETV3P41162 512 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ABCG1P45844 678 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 LSSP48449 732 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 GBE1Q04446 702 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ITKQ08881 620 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 SLC10A2Q12908 348 aaPredicted RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 IHHQ14623 411 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 TBC1D25Q3MII6 688 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 DENND2CQ68D51 928 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ALG1LQ6GMV1 187 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 TIGD7Q6NT04 549 aaPredicted RBP10.47□□□□□ -0.73
SNF8-201ENST00000290330 Q6ZVL8 140 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 USP45Q70EL2 814 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 HSD11B1LQ7Z5J1 315 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 TSPAN33Q86UF1 283 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 LSMEM2Q8N112 164 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 KYQ8NBH2 561 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 SLC35G2Q8TBE7 412 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 RAPGEF5Q92565 580 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 FATE1Q969F0 183 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 GRAMD1AQ96CP6 724 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 DTD2Q96FN9 168 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 CRELD1Q96HD1 420 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 CCDC3Q9BQI4 270 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 TEX101Q9BY14 249 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 POLR1BQ9H9Y6 1135 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 RBM22Q9NW64 420 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNF8-201ENST00000290330 KCTD5Q9NXV2 234 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 SIRPGQ9P1W8 387 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 GPR34Q9UPC5 381 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ENTPD2Q9Y5L3 495 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 RAI2Q9Y5P3 530 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 ASXL3Q9C0F0 2248 aa10.47□□□□□ -0.73
SNF8-201ENST00000290330 CHD6Q8TD26 2715 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 A0A0U1RQS6 177 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 A0A1W2PNU3 283 aaPredicted RBP10.46□□□□□ -0.73
SNF8-201ENST00000290330 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.73
SNF8-201ENST00000290330 MFAP3LO75121 409 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 FUCA1P04066 466 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 MYCLP1P12525 358 aaPredicted RBP10.46□□□□□ -0.73
SNF8-201ENST00000290330 CCNB1P14635 433 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 CTPS1P17812 591 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 MX2P20592 715 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 CES1P23141 567 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 KDELR1P24390 212 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 GABREP78334 506 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 DSC2Q02487 901 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 ARHGEF7Q14155 803 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 MESDQ14696 234 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 ZFYVE27Q5T4F4 411 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 OGFOD3Q6PK18 319 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 LRRC69Q6ZNQ3 347 aa10.46□□□□□ -0.73
SNF8-201ENST00000290330 RBM44Q6ZP01 1051 aaKnown RBP10.46□□□□□ -0.73
SNF8-201ENST00000290330 TECPR1Q7Z6L1 1165 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms