RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ZYG11BQ9C0D3 744 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 S100A14Q9HCY8 104 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 VPS45Q9NRW7 570 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 hCG_1818297A0A087WSY0 165 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 PLOD3O60568 738 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 SHBGP04278 402 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 HUNKP57058 714 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 ACVR2BQ13705 512 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 SLC39A12Q504Y0 691 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 FKBP1CQ5VVH2 108 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 ACER1Q8TDN7 264 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 SNX15Q9NRS6 342 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 GIT1Q9Y2X7 761 aa7.99□□□□□ -1.13
LIMD1-201ENST00000273317 TCRBV5S4A2TA0A5A2 114 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 KCNK1O00180 336 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ENDOD1O94919 500 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PERM1Q5SV97 790 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 DOK6Q6PKX4 331 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 POTEHQ6S545 545 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CRTC3Q6UUV7 619 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 RNF19BQ6ZMZ0 732 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 OTOP1Q7RTM1 612 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 KBTBD2Q8IY47 623 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CHST7Q9NS84 486 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 GULP1Q9UBP9 304 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SH3D21A4FU49 640 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SLITRK3O94933 977 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MBTD1Q05BQ5 628 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 LRRC55Q6ZSA7 311 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PCDH20Q8N6Y1 951 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 OGDHLQ9ULD0 1010 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TNFSF13BQ9Y275 285 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PDE2AO00408 941 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CXCL11O14625 94 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 THOP1P52888 689 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 RPL19P84098 196 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 LIPEQ05469 1076 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PPM1LQ5SGD2 360 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MEIOBQ8N635 442 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CNTD1Q8N815 330 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 GRPEL2Q8TAA5 225 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 RASSF1Q9NS23 344 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MRPS33Q9Y291 106 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 C1QTNF3-AMACRE9PGA6 284 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 OR5F1O95221 314 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 NADKO95544 446 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 COLGALT2Q8IYK4 626 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 DSELQ8IZU8 1212 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SLC4A11Q8NBS3 891 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SLC16A10Q8TF71 515 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TP53INP1Q96A56 240 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 BAZ2AQ9UIF9 1905 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 FAM25EA8MYX2 175 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 LYNP07948 512 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PTPN1P18031 435 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CBX5P45973 191 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 WDR59Q6PJI9 974 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CLPTM1LQ96KA5 538 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 NDOR1Q9UHB4 597 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 POLR3HQ9Y535 204 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PSMD11O00231 422 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ADAMDEC1O15204 470 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ENTPD5O75356 428 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CEBPGP53567 150 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MYBPC1Q00872 1141 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 BEND5Q7L4P6 421 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CRELD1Q96HD1 420 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MARK4Q96L34 752 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 C7orf26Q96N11 449 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CLIC5Q9NZA1 410 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MROH1Q8NDA8 1641 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TECPR2O15040 1411 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TCRBV9S1A1TA0A576 114 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 RLN1P04808 185 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PRKAR2AP13861 404 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PSEN2P49810 448 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CAMK1Q14012 370 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PAN2Q504Q3 1202 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 FNBP1LQ5T0N5 605 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 FOXR1Q6PIV2 292 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 NANOGNBQ7Z5D8 188 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 FAR1Q8WVX9 515 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PPCDCQ96CD2 204 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 RCN3Q96D15 328 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PNMA5Q96PV4 448 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PAK6Q9NQU5 681 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ADARB2Q9NS39 739 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PLLPQ9Y342 182 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 OR14I1A6ND48 311 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 NR4A1P22736 598 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SHMT1P34896 483 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ATP5C1P36542 298 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 BUD31P41223 144 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ARF3P61204 181 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ARF1P84077 181 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 GPR107Q5VW38 600 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 FAM131AQ6UXB0 335 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 RASSF6Q6ZTQ3 369 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms