RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 MRPL17Q9NRX2 175 aaKnown RBP16.9■□□□□ 0.3
CHKA-201ENST00000265689 NOP53Q9NZM5 478 aaKnown RBP16.9■□□□□ 0.3
CHKA-201ENST00000265689 GREM1O60565 184 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 TMCC1O94876 653 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 LINC00271P0C7V0 271 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.34e-24■■■□□ 18.3
CHKA-201ENST00000265689 RFC2P35250 354 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 ZNF140P52738 457 aaPredicted RBP16.9■□□□□ 0.3
CHKA-201ENST00000265689 SLC25A3Q00325 362 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 TIAL1Q01085 375 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■□□□□ 9.5
CHKA-201ENST00000265689 ASPHQ12797 758 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 FAM45BPQ6NSW5 357 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 KLC3Q6P597 504 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 FAM45AQ8TCE6 357 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 LBHD1Q9BQE6 289 aaPredicted RBP16.9■□□□□ 0.3
CHKA-201ENST00000265689 CXorf56Q9H5V9 222 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 IL23AQ9NPF7 189 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 NLE1Q9NVX2 485 aaPredicted RBP16.9■□□□□ 0.3
CHKA-201ENST00000265689 STOML2Q9UJZ1 356 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 G3BP2Q9UN86 482 aaKnown RBP16.9■□□□□ 0.3
CHKA-201ENST00000265689 RAI2Q9Y5P3 530 aa16.9■□□□□ 0.3
CHKA-201ENST00000265689 LOC100653049A0A140TA62 436 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 A8MT66 165 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 MAGEC1O60732 1142 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 KRT34O76011 436 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 CRTAMO95727 393 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 TPBGLP0DKB5 382 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 HDCP19113 662 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 KCNC1P48547 511 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 DNAJB13P59910 316 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 PEX6Q13608 980 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 ACAP2Q15057 778 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 ACSBG2Q5FVE4 666 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
CHKA-201ENST00000265689 WFDC5Q8TCV5 224 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 PHF21BQ96EK2 531 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 TACO1Q9BSH4 297 aaKnown RBP16.89■□□□□ 0.29
CHKA-201ENST00000265689 ALG9Q9H6U8 611 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 NCKIPSDQ9NZQ3 722 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 CPQQ9Y646 472 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 A0A0U1RQS6 177 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 NPHS1O60500 1241 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 ZMPSTE24O75844 475 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 CD1EP15812 388 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 FDXRP22570 491 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 PMLP29590 882 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 RAP1GDS1P52306 607 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 COPAP53621 1224 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 CYP4F8P98187 520 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 PDCD2Q16342 344 aaPredicted RBP16.89■□□□□ 0.29
CHKA-201ENST00000265689 LSM12Q3MHD2 195 aaKnown RBP16.89■□□□□ 0.29
CHKA-201ENST00000265689 DNAL1Q4LDG9 190 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 ARHGAP24Q8N264 748 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 PDCD6IPQ8WUM4 868 aaKnown RBP16.89■□□□□ 0.29
CHKA-201ENST00000265689 MCM8Q9UJA3 840 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 RIMKLBQ9ULI2 386 aa16.89■□□□□ 0.29
CHKA-201ENST00000265689 IPO13O94829 963 aaKnown RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 RBP1P09455 135 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 KLF10Q13118 480 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 TAF1AQ15573 450 aaPredicted RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 PIWIL4Q7Z3Z4 852 aaKnown RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 SCUBE1Q8IWY4 988 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 TMA16Q96EY4 203 aaKnown RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 FEM1AQ9BSK4 669 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 C1orf21Q9H246 121 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 VPS28Q9UK41 221 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 ARIH1Q9Y4X5 557 aaPredicted RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 TM7SF2O76062 418 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 ABL2P42684 1182 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 STC1P52823 247 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 TRAF2Q12933 501 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 NAA25Q14CX7 972 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 SH2D4BQ5SQS7 431 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 METTL21CQ5VZV1 264 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 SDCCAG8Q86SQ7 713 aaPredicted RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 ISCA2Q86U28 154 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 ULK2Q8IYT8 1036 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 ENDOVQ8N8Q3 282 aaKnown RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 KLHL23Q8NBE8 558 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 SHKBP1Q8TBC3 707 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 PTERQ96BW5 349 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 LHX3Q9UBR4 397 aa16.88■□□□□ 0.29
CHKA-201ENST00000265689 FCF1Q9Y324 198 aaKnown RBP16.88■□□□□ 0.29
CHKA-201ENST00000265689 FGF18O76093 207 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 FGBP02675 491 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 GNAZP19086 355 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 OGNP20774 298 aaKnown RBP16.87■□□□□ 0.29
CHKA-201ENST00000265689 GABRR2P28476 465 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 CSKP41240 450 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 CDKN1CP49918 316 aaPredicted RBP16.87■□□□□ 0.29
CHKA-201ENST00000265689 NSUN2Q08J23 767 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHKA-201ENST00000265689 RALGPS1Q5JS13 557 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 TMEM240Q5SV17 173 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 Q6ZNB5 142 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 RYBPQ8N488 228 aaPredicted RBP16.87■□□□□ 0.29
CHKA-201ENST00000265689 EFHBQ8N7U6 833 aa16.87■□□□□ 0.29
CHKA-201ENST00000265689 CNDP1Q96KN2 507 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms