RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 HSP90AA5PQ58FG0 334 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TMEM31Q5JXX7 168 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SPANXN3Q5MJ09 141 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 LRRC66Q68CR7 880 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 FBXL19Q6PCT2 694 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TRMT11Q7Z4G4 463 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 DSG4Q86SJ6 1040 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 HDDC3Q8N4P3 179 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 OR2T3Q8NH03 318 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 EPS8L3Q8TE67 593 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 HDAC10Q969S8 669 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 SHDQ96IW2 340 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TBATAQ96M53 351 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MCCC1Q96RQ3 725 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 AGAP2Q99490 1192 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 WRAP53Q9BUR4 548 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 ZFYVE1Q9HBF4 777 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 C20orf96Q9NUD7 363 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 MOCS1Q9NZB8 636 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 DKK3Q9UBP4 350 aa9.75□□□□□ -0.85
SNRNP40-201ENST00000263694 TCRBV21S2A2A0A5A6 115 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 TLDC2A0PJX2 215 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CCDC162PA2VCL2 907 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 C2orf81A6NN90 581 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 FOXO6A8MYZ6 492 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 C1QTNF3-AMACRE9PGA6 284 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 AGPSO00116 658 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 STX7O15400 261 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 GPR39O43194 453 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 RNASEH1O60930 286 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CRTAMO95727 393 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 DCNP07585 359 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 C1SP09871 688 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 ADRB3P13945 408 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 GCAP28676 217 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 PHBP35232 272 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 P2RY2P41231 377 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 ARCN1P48444 511 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 ZNF844Q08AG5 666 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 IFFO1Q0D2I5 559 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 RALGDSQ12967 914 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 E2F5Q15329 346 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CRY1Q16526 586 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 EOGTQ5NDL2 527 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 PIP5KL1Q5T9C9 394 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 ZNF776Q68DI1 518 aaPredicted RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 USP45Q70EL2 814 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 ERN2Q76MJ5 926 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 HSD11B1LQ7Z5J1 315 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 PTAR1Q7Z6K3 402 aaPredicted RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CTAGE3PQ8IX95 158 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 PPM1NQ8N819 430 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 OR6P1Q8NGX9 317 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 GANCQ8TET4 914 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 HMGB4Q8WW32 186 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 MRGPRX1Q96LB2 322 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 NAT9Q9BTE0 207 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM96AQ9H5X1 160 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 MRM3Q9HC36 420 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 DYRK4Q9NR20 520 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 IARS2Q9NSE4 1012 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 NLE1Q9NVX2 485 aaPredicted RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 IL17CQ9P0M4 197 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CTNNAL1Q9UBT7 734 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 CD84Q9UIB8 345 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 FKBPLQ9UIM3 349 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 MRPS17Q9Y2R5 130 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 COQ6Q9Y2Z9 468 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 TRPM6Q9BX84 2022 aa9.74□□□□□ -0.85
SNRNP40-201ENST00000263694 EXOC1LA0A1B0GW35 172 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM159BA6NKW6 160 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 RNASEH2AO75792 299 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 ALDH1A2O94788 518 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 ADH1BP00325 375 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 GOT2P00505 430 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 ABHD2P08910 425 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 NUDT17P0C025 328 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 TSHRP16473 764 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 GABRG2P18507 467 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 NDUFV2P19404 249 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 VIPR1P32241 457 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 CA5AP35218 305 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 MMP12P39900 470 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 ABCG1P45844 678 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 CDKN1CP49918 316 aaPredicted RBP9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 NEK3P51956 506 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 TAS2R38P59533 333 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 CTBP1Q13363 440 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 LRRC32Q14392 662 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 SKIDA1Q1XH10 827 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 SPDYCQ5MJ68 293 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 CEP85LQ5SZL2 805 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM46CQ5VWP2 391 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 ALS2CLQ60I27 953 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 KIAA1324Q6UXG2 1013 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 LDB1Q86U70 411 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms