RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 BRD9Q9H8M2 597 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 TSPAN11A1L157 253 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 TBC1D3BA6NDS4 549 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 H7C0S8 307 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 TM9SF1O15321 606 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 CD3EAPO15446 510 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 LEFTY1O75610 366 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 KAT7O95251 611 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 CTSLP07711 333 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 GRIA2P42262 883 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 WDR4P57081 412 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 ZNF234Q14588 700 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 LRRC14Q15048 493 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 HNRNPA1L2Q32P51 320 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 PREPLQ4J6C6 727 aaPredicted RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 FNDC3BQ53EP0 1204 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 ZNF366Q8N895 744 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 ACVR1CQ8NER5 493 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 TCP10LQ8TDR4 215 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 SCRN2Q96FV2 425 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 OSBPL1AQ9BXW6 950 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 TMEM245Q9H330 911 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 MLXIPLQ9NP71 852 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 FBXO6Q9NRD1 293 aaPredicted RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 SNX15Q9NRS6 342 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 CATSPERZQ9NTU4 200 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 PCMTD2Q9NV79 361 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 IL36AQ9UHA7 158 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 XIRP2A4UGR9 3374 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 COPEO14579 308 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 HAUS5O94927 633 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 ASMTLO95671 621 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 OGNP20774 298 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 CSRP3P50461 194 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 ARSIQ5FYB1 569 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 MRNIPQ6NTE8 343 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 BRAT1Q6PJG6 821 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 NDUFAF2Q8N183 169 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 OTUD6BQ8N6M0 293 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 UCMAQ8WVF2 138 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 CCDC134Q9H6E4 229 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 ZFYVE1Q9HBF4 777 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 FKBPLQ9UIM3 349 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 PKP3Q9Y446 797 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 TRIOBPQ9H2D6 2365 aa22.9■■□□□ 1.26
SMARCB1-201ENST00000263121 SCN8AQ9UQD0 1980 aa22.89■■□□□ 1.26
SMARCB1-201ENST00000263121 TICRRQ7Z2Z1 1910 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 C1orf232A0A0U1RR37 186 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 EDDM13A0A1B0GTR0 161 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 NPIPB15A6NHN6 443 aaPredicted RBP22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 S1PR4O95977 384 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 TYK2P29597 1187 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 POLD2P49005 469 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 SMAD4Q13485 552 aaKnown RBP22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 PDE1CQ14123 709 aaPredicted RBP22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 SEMA3AQ14563 771 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 ZNF789Q5FWF6 425 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 CNSTQ6PJW8 725 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 CDHR3Q6ZTQ4 885 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 TPRG1Q6ZUI0 275 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 USP45Q70EL2 814 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 UBE2ZQ9H832 354 aaPredicted RBP22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 BPIFA1Q9NP55 256 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 HCN2Q9UL51 889 aa22.89■■□□□ 1.25
SMARCB1-201ENST00000263121 SRRM3A6NNA2 597 aaPredicted RBP22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 C2CD4DB7Z1M9 353 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 MBTPS2O43462 519 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 KCNA5P22460 613 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 FOXN2P32314 431 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 CRHR1P34998 444 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 POLR2LP62875 67 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 AAK1Q2M2I8 961 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 TYSND1Q2T9J0 566 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 CMC1Q7Z7K0 106 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 LDB1Q86U70 411 aaPredicted RBP22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 HCAR2Q8TDS4 363 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 SCG3Q8WXD2 468 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 SLC17A7Q9P2U7 560 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 THAP10Q9P2Z0 257 aaPredicted RBP22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 DKK3Q9UBP4 350 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 COL4A2P08572 1712 aa22.88■■□□□ 1.25
SMARCB1-201ENST00000263121 FAM95CA0A1B0GW59 222 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 CLDN7O95471 211 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 APODP05090 189 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 HLA-EP13747 358 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 SOX9P48436 509 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 XIAPP98170 497 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 PEX6Q13608 980 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 C9orf64Q5T6V5 341 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 CRTC1Q6UUV9 634 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 PNPLA1Q8N8W4 532 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 CSGALNACT1Q8TDX6 532 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 SLC13A1Q9BZW2 595 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 CAB39LQ9H9S4 337 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 SLC39A10Q9ULF5 831 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 ZNF106Q9H2Y7 1883 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 BRWD1Q9NSI6 2320 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 MPOP05164 745 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 MC4RP32245 332 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 ETV4P43268 484 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms