RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 DEFB133Q30KQ1 61 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 HS1BP3Q53T59 392 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 LRRC66Q68CR7 880 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 ESRP1Q6NXG1 681 aaKnown RBP22.97■■□□□ 1.27
LSM4-201ENST00000252816 PNCKQ6P2M8 343 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 CRTC1Q6UUV9 634 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 Q6ZVL8 140 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 KIAA1328Q86T90 577 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 HID1Q8IV36 788 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 CCDC50Q8IVM0 306 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 LRRC57Q8N9N7 239 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 FAM181AQ8N9Y4 354 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 CALR3Q96L12 384 aaKnown RBP22.97■■□□□ 1.27
LSM4-201ENST00000252816 WDR92Q96MX6 357 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 AGAP3Q96P47 875 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 DESI2Q9BSY9 194 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 DUSP23Q9BVJ7 150 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 SLC13A1Q9BZW2 595 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 CLPBQ9H078 707 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 PCDH9Q9HC56 1237 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.97■■□□□ 1.27
LSM4-201ENST00000252816 U3KQA8 63 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 WDFY3Q8IZQ1 3526 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 USP24Q9UPU5 2620 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 GRID2IPA4D2P6 1211 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 FAM149AA5PLN7 773 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 TMEM202A6NGA9 273 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 PSMD11O00231 422 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 PROS1P07225 676 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 CKMT1AP12532 417 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 TSHRP16473 764 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 TGM2P21980 687 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 HTR1BP28222 390 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 CTNNA1P35221 906 aaKnown RBP22.96■■□□□ 1.27
LSM4-201ENST00000252816 HK3P52790 923 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 EPHB1P54762 984 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 KIAA1024LP59773 190 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 SRP54P61011 504 aaKnown RBP22.96■■□□□ 1.27
LSM4-201ENST00000252816 ARHGEF7Q14155 803 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 TECPR1Q7Z6L1 1165 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 NDUFAF2Q8N183 169 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 LPCAT1Q8NF37 534 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 RBM41Q96IZ5 413 aaKnown RBP22.96■■□□□ 1.27
LSM4-201ENST00000252816 TBATAQ96M53 351 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 LGR4Q9BXB1 951 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 TRIM10Q9UDY6 481 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 PCDHA3Q9Y5H8 950 aa22.96■■□□□ 1.27
LSM4-201ENST00000252816 FREM2Q5SZK8 3169 aa22.95■■□□□ 1.27
LSM4-201ENST00000252816 CAPN8A6NHC0 703 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 HOXC4P09017 264 aaPredicted RBP22.95■■□□□ 1.26
LSM4-201ENST00000252816 CA4P22748 312 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 PTPN3P26045 913 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 RPL26P61254 145 aaKnown RBP22.95■■□□□ 1.26
LSM4-201ENST00000252816 DAB2P98082 770 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 PTSQ03393 145 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 ILKQ13418 452 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 TCEA2Q15560 299 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 PPP2R5EQ16537 467 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 BZW1Q7L1Q6 419 aaKnown RBP22.95■■□□□ 1.26
LSM4-201ENST00000252816 GALNT15Q8N3T1 639 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 KIAA1524Q8TCG1 905 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 TFB1MQ8WVM0 346 aaKnown RBP22.95■■□□□ 1.26
LSM4-201ENST00000252816 OR1E3Q8WZA6 343 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 HAUS1Q96CS2 278 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 IMP4Q96G21 291 aaKnown RBP22.95■■□□□ 1.26
LSM4-201ENST00000252816 PDXPQ96GD0 296 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 RBM15Q96T37 977 aaKnown RBP eCLIP22.95■■□□□ 1.265e-7■■■■□ 23.6
LSM4-201ENST00000252816 HERPUD2Q9BSE4 406 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 HEMGNQ9BXL5 484 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 WDR26Q9H7D7 661 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 FGF22Q9HCT0 170 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 KLQ9UEF7 1012 aa22.95■■□□□ 1.26
LSM4-201ENST00000252816 RPL26L1Q9UNX3 145 aaKnown RBP22.95■■□□□ 1.26
LSM4-201ENST00000252816 LMO7DNF2Z398 122 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 CACNB4O00305 520 aaPredicted RBP22.94■■□□□ 1.26
LSM4-201ENST00000252816 TPP1O14773 563 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 RASGRP1O95267 797 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 CDK4P11802 303 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 BLKP51451 505 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 QPCTQ16769 361 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 TEX44Q53QW1 395 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 ZCCHC8Q6NZY4 707 aaKnown RBP22.94■■□□□ 1.26
LSM4-201ENST00000252816 RD3Q7Z3Z2 195 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 NT5DC3Q86UY8 548 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 P3H4Q92791 437 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 TADA1Q96BN2 335 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 SLC25A51Q9H1U9 297 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 KCTD5Q9NXV2 234 aa22.94■■□□□ 1.26
LSM4-201ENST00000252816 LRP4O75096 1905 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 YY2O15391 372 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 CTNNA2P26232 953 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 STC1P52823 247 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 WASHC5Q12768 1159 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 CDKN3Q16667 212 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 ST3GAL2Q16842 350 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 BBS12Q6ZW61 710 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 ZC3H18Q86VM9 953 aaKnown RBP22.93■■□□□ 1.26
LSM4-201ENST00000252816 TMPRSS12Q86WS5 348 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 HEATR4Q86WZ0 1026 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 OR56A4Q8NGH8 313 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms