RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 SLC8A1P32418 973 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 STX2P32856 288 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 SEC24CP53992 1094 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 MTA1Q13330 715 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 TTC31Q49AM3 519 aaPredicted RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 RWDD4Q6NW29 188 aaKnown RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 LRRC8BQ6P9F7 803 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 USP30Q70CQ3 517 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 DCAKDQ8WVC6 231 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 SNX19Q92543 992 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 EBNA1BP2Q99848 306 aaKnown RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 CEP41Q9BYV8 373 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 EBF2Q9HAK2 575 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 IL21RQ9HBE5 538 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 PPANQ9NQ55 473 aaKnown RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 DNAAF2Q9NVR5 837 aaKnown RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 ZC3H7BQ9UGR2 993 aaKnown RBP17.5■□□□□ 0.39
HOXC6-201ENST00000243108 VPS28Q9UK41 221 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 SARDHQ9UL12 918 aa17.5■□□□□ 0.39
HOXC6-201ENST00000243108 CABIN1Q9Y6J0 2220 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 A0A0D9SEW6 157 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 E9PAM4 449 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 PLK4O00444 970 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 ATP9BO43861 1147 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 SNAP91O60641 907 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 FAM107AO95990 144 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 SYPP08247 313 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 GRIA1P42261 906 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 PSMD8P48556 350 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 CSNK1EP49674 416 aaKnown RBP17.49■□□□□ 0.39
HOXC6-201ENST00000243108 PPARDQ03181 441 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 SULT2A1Q06520 285 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 AFMIDQ63HM1 303 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 LAYNQ6UX15 382 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 PID1Q7Z2X4 250 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 TFAP2DQ7Z6R9 452 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 PDCD7Q8N8D1 485 aaKnown RBP17.49■□□□□ 0.39
HOXC6-201ENST00000243108 GORASP1Q9BQQ3 440 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 GBA3Q9H227 469 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 SGK2Q9HBY8 427 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 KLHL8Q9P2G9 620 aaPredicted RBP17.49■□□□□ 0.39
HOXC6-201ENST00000243108 SCML1Q9UN30 329 aa17.49■□□□□ 0.39
HOXC6-201ENST00000243108 NDUFAB1O14561 156 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 RNASEH1O60930 286 aaKnown RBP17.48■□□□□ 0.39
HOXC6-201ENST00000243108 FSBPO95073 299 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 CPP00450 1065 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 VASPP50552 380 aaPredicted RBP17.48■□□□□ 0.39
HOXC6-201ENST00000243108 SLC18A1P54219 525 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 OXCT1P55809 520 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 MPP2Q14168 576 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 DLG2Q15700 870 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 TEX44Q53QW1 395 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 RTL3Q8N8U3 475 aaKnown RBP17.48■□□□□ 0.39
HOXC6-201ENST00000243108 GANCQ8TET4 914 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 MZB1Q8WU39 189 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 SLC44A1Q8WWI5 657 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 CFAP36Q96G28 342 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 CAMK1GQ96NX5 476 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 CCT8L2Q96SF2 557 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 WASF3Q9UPY6 502 aa17.48■□□□□ 0.39
HOXC6-201ENST00000243108 KMT2BQ9UMN6 2715 aaPredicted RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 FAM47DPA6NHR8 397 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 UPK3BL1B0FP48 263 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 UPK3BL2E5RIL1 263 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 K7ERQ8 282 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 PRPF4O43172 522 aaKnown RBP eCLIP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 RNASEH2AO75792 299 aaKnown RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 SUN1O94901 812 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 GLDCP23378 1020 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 CCNCP24863 283 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 CD68P34810 354 aaPredicted RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 DRD3P35462 400 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 MSH2P43246 934 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 ZBTB17Q13105 803 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 ELAVL3Q14576 367 aaKnown RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 KBTBD12Q3ZCT8 623 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 STEAP4Q687X5 459 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 NCEH1Q6PIU2 408 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 FOXR1Q6PIV2 292 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 UNC5AQ6ZN44 842 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 Q6ZVU0 165 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 KLHDC8BQ8IXV7 354 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 MPP5Q8N3R9 675 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 HDDC3Q8N4P3 179 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 CELF6Q96J87 481 aaKnown RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 TEKT5Q96M29 485 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 ZNF317Q96PQ6 595 aaPredicted RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 MUC3BQ9H195 1237 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 TRABDQ9H4I3 376 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 RABEP2Q9H5N1 569 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 TM9SF3Q9HD45 589 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 VPS51Q9UID3 782 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 SHROOM3Q8TF72 1996 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 A0A1B0GVT2 93 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 ERI2A8K979 691 aaKnown RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 SMAD6O43541 496 aaKnown RBP17.47■□□□□ 0.39
HOXC6-201ENST00000243108 AP2A1O95782 977 aa17.47■□□□□ 0.39
HOXC6-201ENST00000243108 IL1BP01584 269 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms