RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 CAMK1DQ8IU85 385 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 PHACTR4Q8IZ21 702 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 RBFAQ8N0V3 343 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 TSEN2Q8NCE0 465 aaKnown RBP18.09■□□□□ 0.49
PFN1-201ENST00000225655 CCNYQ8ND76 341 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 IFI44Q8TCB0 444 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 MAIP1Q8WWC4 291 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 ZNF599Q96NL3 588 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 DCBLD2Q96PD2 775 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 DEPDC7Q96QD5 511 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 IL12RB2Q99665 862 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 TLR10Q9BXR5 811 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 SLC13A1Q9BZW2 595 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 ABCG4Q9H172 646 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 ATP13A3Q9H7F0 1226 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 PNMA8BQ9ULN7 279 aaPredicted RBP18.09■□□□□ 0.49
PFN1-201ENST00000225655 CTAGE9A4FU28 777 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 APOC4-APOC2K7ER74 178 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 TLX3O43711 291 aaPredicted RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 BRINP1O60477 761 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 APOC2P02655 101 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 C6P13671 934 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 SERPINA4P29622 427 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 MMP12P39900 470 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 GARSP41250 739 aaKnown RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 RGRP47804 291 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 GBE1Q04446 702 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 NSUN2Q08J23 767 aaKnown RBP eCLIP18.08■□□□□ 0.48
PFN1-201ENST00000225655 AGERQ15109 404 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 CDKN3Q16667 212 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 WSCD2Q2TBF2 565 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 PRRT3Q5FWE3 981 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 SNIP1Q8TAD8 396 aaKnown RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 HAUS1Q96CS2 278 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 PBKQ96KB5 322 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 NAP1L3Q99457 506 aaPredicted RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 NAPGQ99747 312 aaPredicted RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 LRRC61Q9BV99 259 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 CINPQ9BW66 212 aaPredicted RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 BOCQ9BWV1 1114 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 TCEAL2Q9H3H9 227 aaPredicted RBP18.08■□□□□ 0.48
PFN1-201ENST00000225655 DTLQ9NZJ0 730 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 ATP8A1Q9Y2Q0 1164 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 COQ6Q9Y2Z9 468 aa18.08■□□□□ 0.48
PFN1-201ENST00000225655 ASXL3Q9C0F0 2248 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 ATRXP46100 2492 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 LMO7DNF2Z398 122 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 LZTS3O60299 673 aaPredicted RBP18.07■□□□□ 0.48
PFN1-201ENST00000225655 GCATO75600 419 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 ACTN2P35609 894 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 ABCG1P45844 678 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 LIG3P49916 1009 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 BLKP51451 505 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 RENBPP51606 427 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 PPARDQ03181 441 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 LLGL1Q15334 1064 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 NR0B2Q15466 257 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 FAXCQ5TGI0 409 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 ARHGAP36Q6ZRI8 547 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 MAPK15Q8TD08 544 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 HDAC11Q96DB2 347 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 ECHDC3Q96DC8 303 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 PCDHB1Q9Y5F3 818 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 LRP4O75096 1905 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 IGSF10Q6WRI0 2623 aa18.07■□□□□ 0.48
PFN1-201ENST00000225655 COL27A1Q8IZC6 1860 aaPredicted RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 CPED1A4D0V7 1026 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 EME2A4GXA9 379 aaPredicted RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 CFAP69A5D8W1 941 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 RRP8O43159 456 aaKnown RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 MTSS1O43312 755 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 CEP104O60308 925 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 CSO75390 466 aaKnown RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 TUBB4AP04350 444 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 TCP1P17987 556 aaKnown RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 CCNCP24863 283 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 RPIAP49247 311 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 ZNF235Q14590 738 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 TBC1D25Q3MII6 688 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 C6orf132Q5T0Z8 1188 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 GUSBP11Q6P575 273 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 LRRC69Q6ZNQ3 347 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 EFL1Q7Z2Z2 1120 aaKnown RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 TFB1MQ8WVM0 346 aaKnown RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 FGF11Q92914 225 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 GLMNQ92990 594 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 FATE1Q969F0 183 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 TSGA13Q96PP4 275 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 PSKH2Q96QS6 385 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 FRMD8P1Q9BZ68 369 aaPredicted RBP18.06■□□□□ 0.48
PFN1-201ENST00000225655 SEPT3Q9UH03 358 aa18.06■□□□□ 0.48
PFN1-201ENST00000225655 HACD1B0YJ81 288 aa18.05■□□□□ 0.48
PFN1-201ENST00000225655 MAFKO60675 156 aa18.05■□□□□ 0.48
PFN1-201ENST00000225655 ATP1A1P05023 1023 aaKnown RBP18.05■□□□□ 0.48
PFN1-201ENST00000225655 ANXA6P08133 673 aa18.05■□□□□ 0.48
PFN1-201ENST00000225655 TSHRP16473 764 aa18.05■□□□□ 0.48
PFN1-201ENST00000225655 HTR1BP28222 390 aa18.05■□□□□ 0.48
PFN1-201ENST00000225655 HK3P52790 923 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms