RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TCAF2A6NFQ2 919 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 ARL5CA6NH57 179 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 NBNO60934 754 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 MED26O95402 600 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 CAP1Q01518 475 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 PTPN20Q4JDL3 420 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 TCAIMQ8N3R3 496 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 KREMEN2Q8NCW0 462 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 PRG2P13727 222 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 CDH4P55283 916 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 FNBP1LQ5T0N5 605 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 NRSN1Q8IZ57 195 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 OR4K2Q8NGD2 314 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 PHF10Q8WUB8 498 aaKnown RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 EXD2Q9NVH0 621 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 GSTK1Q9Y2Q3 226 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 RAP2CQ9Y3L5 183 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 TMEM131LA2VDJ0 1609 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 A0A0G2JLL6 359 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 NDST3O95803 873 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 C8AP07357 584 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 IGFALSP35858 605 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 SLC34A1Q06495 639 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 ATP13A5Q4VNC0 1218 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 ZNF57Q68EA5 555 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 PRRT2Q7Z6L0 340 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 DQX1Q8TE96 717 aaKnown RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 AENQ8WTP8 325 aaKnown RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 IL12RB2Q99665 862 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 HBS1LQ9Y450 684 aaKnown RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 TRBV23OR9-2A0A075B6M9 112 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 VARS2Q5ST30 1063 aaKnown RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 LIPMQ5VYY2 423 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 FOXR2Q6PJQ5 311 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 ARCQ7LC44 396 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 NETO2Q8NC67 525 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 LENG1Q96BZ8 264 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-201ENST00000219334 VPS35Q96QK1 796 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 FNDC11Q9BVV2 318 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 SEMA3GQ9NS98 782 aa18.96■□□□□ 0.63
SMPD3-201ENST00000219334 CASZ1Q86V15 1759 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 WWP2O00308 870 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 PPIBP23284 216 aaKnown RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 BUD31P41223 144 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 SRSF11Q05519 484 aaKnown RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 FAM171BQ6P995 826 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 SRFBP1Q8NEF9 429 aaKnown RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 DNAJB14Q8TBM8 379 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MARK4Q96L34 752 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MYLK2Q9H1R3 596 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MAFBQ9Y5Q3 323 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 ROBO3Q96MS0 1386 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 POP4O95707 220 aaKnown RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 PCCBP05166 539 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 ARL2P36404 184 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MANFP55145 182 aaKnown RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 ITCHQ96J02 903 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 C6orf62Q9GZU0 229 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 FAM83DQ9H4H8 585 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 ARHGEF4Q9NR80 690 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MKL2Q9ULH7 1088 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 PCDHGB3Q9Y5G1 929 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 CPQQ9Y646 472 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 RHPN2P1A8MT19 583 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 RFXANKO14593 260 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 PER2O15055 1255 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 BCL10O95999 233 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 SNHG28P0DPA3 235 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MARCKSL1P49006 195 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 ARSHQ5FYA8 562 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 PRELID2Q8N945 189 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 CSPG4P5Q96PW8 444 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 SGK2Q9HBY8 427 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 SNX15Q9NRS6 342 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 PKMP14618 531 aaKnown RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 FPGSQ05932 587 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 UBXN2BQ14CS0 331 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 TIMM50Q3ZCQ8 353 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 MCEMP1Q8IX19 187 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 SPATA6LQ8N4H0 392 aa18.95■□□□□ 0.62
SMPD3-201ENST00000219334 ARL14EPQ8N8R7 260 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-201ENST00000219334 HDAC3O15379 428 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ALAS2P22557 587 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ECM1Q16610 540 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 C9orf64Q5T6V5 341 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 CERS6Q6ZMG9 384 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 C2orf15Q8WU43 125 aaKnown RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 FSCN2O14926 492 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 EPHB6O15197 1021 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 FSBPO95073 299 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 CBX6O95503 412 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ACRP10323 421 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 DGKGP49619 791 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 HNMTP50135 292 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 CCR3P51677 355 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 SEC13P55735 322 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 SP2Q02086 613 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 EVX2Q03828 476 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ZNF563Q8TA94 476 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms