RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 MARC1Q5VT66 337 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 NCBP2-AS2Q69YL0 99 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 LVRNQ6Q4G3 990 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 Q6ZVL8 140 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 ZNF248Q8NDW4 579 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 GPR156Q8NFN8 814 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 TPCN2Q8NHX9 752 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 ZNF564Q8TBZ8 553 aaPredicted RBP22.15■■□□□ 1.14
VTI1B-201ENST00000216456 SCG3Q8WXD2 468 aaKnown RBP22.15■■□□□ 1.14
VTI1B-201ENST00000216456 SLC46A1Q96NT5 459 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 XPO4Q9C0E2 1151 aaKnown RBP22.15■■□□□ 1.14
VTI1B-201ENST00000216456 CD84Q9UIB8 345 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 ST14Q9Y5Y6 855 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 GOLGA6L19H0YKK7 550 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 MYO1FO00160 1098 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 SOCS5O75159 536 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 PGLSO95336 258 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 HGFP14210 728 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 POLD2P49005 469 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 DSC2Q02487 901 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 HEATR4Q86WZ0 1026 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 CBARPQ8N350 705 aaPredicted RBP22.14■■□□□ 1.13
VTI1B-201ENST00000216456 FAM71BQ8TC56 605 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 PIH1D2Q8WWB5 315 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 SEMA3CQ99985 751 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 RNF215Q9Y6U7 377 aa22.14■■□□□ 1.13
VTI1B-201ENST00000216456 PRSS38A1L453 326 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 GOLGA6CA6NDK9 693 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 GOLGA6BA6NDN3 693 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 KLK10O43240 276 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 TCEA3O75764 348 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 GOLGA6DP0CG33 693 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 HSPA9P38646 679 aaKnown RBP22.13■■□□□ 1.13
VTI1B-201ENST00000216456 ITKQ08881 620 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 ZSCAN23Q3MJ62 389 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 PCSK4Q6UW60 755 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 TMPRSS9Q7Z410 1059 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 NRROSQ86YC3 692 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 LSMEM2Q8N112 164 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 ATL2Q8NHH9 583 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 KCNE4Q8WWG9 221 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 SPOCK2Q92563 424 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 DTD2Q96FN9 168 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 CARS2Q9HA77 564 aaKnown RBP22.13■■□□□ 1.13
VTI1B-201ENST00000216456 EPB41L5Q9HCM4 733 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 SPATS2LQ9NUQ6 558 aaKnown RBP22.13■■□□□ 1.13
VTI1B-201ENST00000216456 GOLGA6AQ9NYA3 693 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 CTTNBP2NLQ9P2B4 639 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 PHTF1Q9UMS5 762 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 PLEKHM1Q9Y4G2 1056 aa22.13■■□□□ 1.13
VTI1B-201ENST00000216456 ATMQ13315 3056 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 D6RAR5 112 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 TNFSF15O95150 251 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 CEACAM5P06731 702 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 AK4P27144 223 aaPredicted RBP22.12■■□□□ 1.13
VTI1B-201ENST00000216456 RBMS1P29558 406 aaKnown RBP22.12■■□□□ 1.13
VTI1B-201ENST00000216456 SERPINB6P35237 376 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 MAZP56270 477 aaKnown RBP22.12■■□□□ 1.13
VTI1B-201ENST00000216456 ERVPABLB-1P60509 514 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 GBE1Q04446 702 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 GALNT2Q10471 571 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 ARMC12Q5T9G4 340 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 TRIM74Q86UV6 250 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 TEX26Q8N6G2 289 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 PQLC3Q8N755 202 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 PATE1Q8WXA2 126 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 GFM1Q96RP9 751 aaKnown RBP22.12■■□□□ 1.13
VTI1B-201ENST00000216456 LRRN3Q9H3W5 708 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 DPEP2Q9H4A9 486 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 THSD1Q9NS62 852 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 TTLL3Q9Y4R7 772 aa22.12■■□□□ 1.13
VTI1B-201ENST00000216456 KALRNO60229 2985 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 C1QL1O75973 258 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 HOXC4P09017 264 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 MYCLP1P12525 358 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 GARSP41250 739 aaKnown RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 GNPDA1P46926 289 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 NIPAL4Q0D2K0 466 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 SLC10A2Q12908 348 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 ANKRD20A8PQ5CZ79 823 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 ARHGAP40Q5TG30 622 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 SPECC1LQ69YQ0 1117 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 OGFOD3Q6PK18 319 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 DOK6Q6PKX4 331 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 GPR155Q7Z3F1 870 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 WDR36Q8NI36 951 aaKnown RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 NSMCE1Q8WV22 266 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 SCRN2Q96FV2 425 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 MCCC1Q96RQ3 725 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 UBL7Q96S82 380 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-201ENST00000216456 AGAP2Q99490 1192 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 TEX101Q9BY14 249 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 PCDHGA8Q9Y5G5 932 aa22.11■■□□□ 1.13
VTI1B-201ENST00000216456 CCDC187A0A096LP49 1063 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 CDRT15L2A8MXV6 281 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 TNFRSF10CO14798 259 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 FZD6O60353 706 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 PROSCO94903 275 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 SOD1P00441 154 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 CDK3Q00526 305 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms