RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 GPRC5AQ8NFJ5 357 aa16.78■□□□□ 0.28
CTDP1-201ENST00000075430 NPLQ9BXD5 320 aaPredicted RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.78■□□□□ 0.28
CTDP1-201ENST00000075430 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 SLCO1B7G3V0H7 640 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 POLR2IP36954 125 aaKnown RBP16.77■□□□□ 0.28
CTDP1-201ENST00000075430 NKX2-5P52952 324 aaPredicted RBP16.77■□□□□ 0.28
CTDP1-201ENST00000075430 TSPY1Q01534 308 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 PKDCCQ504Y2 493 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 PKN3Q6P5Z2 889 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 TBPL2Q6SJ96 375 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 SLC15A3Q8IY34 581 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 C19orf60Q96EN9 201 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 GBA3Q9H227 469 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.28
CTDP1-201ENST00000075430 MEIS3P2A8K0S8 358 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 HMBSP08397 361 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 MYL3P08590 195 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 ALDH3B2P48448 385 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 STRADAQ7RTN6 431 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 MILR1Q7Z6M3 343 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 FUNDC1Q8IVP5 155 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 PAF1Q8N7H5 531 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 KCTD14Q9BQ13 255 aaPredicted RBP16.77■□□□□ 0.27
CTDP1-201ENST00000075430 MARCH7Q9H992 704 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 ITM2CQ9NQX7 267 aa16.77■□□□□ 0.27
CTDP1-201ENST00000075430 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 SUPT3HB4E1H0 165 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ARPC2O15144 300 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 CCNA2P20248 432 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ARL13BQ3SXY8 428 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 MRPL57Q9BQC6 102 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ABCG8Q9H221 673 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 HIPK3Q9H422 1215 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 RMI1Q9H9A7 625 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 EML4Q9HC35 981 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 SUCOQ9UBS9 1254 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 GJB3O75712 270 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 EDNRBP24530 442 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 FRG1Q14331 258 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 AAK1Q2M2I8 961 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 AGAP9Q5VTM2 703 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ABRAXAS1Q6UWZ7 409 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ERMP1Q7Z2K6 904 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 TEKT5Q96M29 485 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 SMURF2Q9HAU4 748 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 SYNCRIPO60506 623 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ADAM23O75077 832 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 H2AFYO75367 372 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 PIK3CGP48736 1102 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 NPY2RP49146 381 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 AFF1P51825 1210 aaKnown RBP16.76■□□□□ 0.27
CTDP1-201ENST00000075430 MTPNP58546 118 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 CCNA1P78396 465 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 NAB1Q13506 487 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 DCDC5Q6ZRR9 648 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 FIG4Q92562 907 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ALG2Q9H553 416 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 GID8Q9NWU2 228 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 ZNF229Q9UJW7 825 aa16.76■□□□□ 0.27
CTDP1-201ENST00000075430 A0A0U1RQS6 177 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CNMDO75829 334 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 PIM1P11309 404 aaPredicted RBP16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CYP4B1P13584 511 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CCR1P32246 355 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 BEX3Q00994 111 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 UGP2Q16851 508 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 SDHAF4Q5VUM1 108 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 C9orf131Q5VYM1 1079 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 Q6ZNX1 250 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 TBC1D15Q8TC07 691 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 RDH11Q8TC12 318 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 BORCS5Q969J3 196 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 GLT1D1Q96MS3 346 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 PRDM16Q9HAZ2 1276 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 ZNF638Q14966 1978 aaKnown RBP16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 ENPP3O14638 875 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 DCLK1O15075 740 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 NPR3P17342 541 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 ARHGAP1Q07960 439 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CCL15Q16663 113 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 RGS21Q2M5E4 152 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 SGO1Q5FBB7 561 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 PCID2Q5JVF3 399 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 OTUD1Q5VV17 481 aaPredicted RBP16.75■□□□□ 0.27
CTDP1-201ENST00000075430 MAML3Q96JK9 1138 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CMTM6Q9NX76 183 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 MCM3APO60318 1980 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 SMIM28A0A1B0GU29 152 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 CASTOR2A6NHX0 329 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 PDHXO00330 501 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 E2F6O75461 281 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 ESRRBO95718 433 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 MAGEA8P43361 318 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 RPS9P46781 194 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms