RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ANKRD12Q6UB98 2062 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 LRRC14BA6NHZ5 514 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PPP6CO00743 305 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PCSK6P29122 969 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 NDST2P52849 883 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 NME5P56597 212 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 POU4F1Q01851 419 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 KLHDC8BQ8IXV7 354 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 RDH11Q8TC12 318 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 RHBDL2Q9NX52 303 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.16□□□□□ -0.3
CTNS-201ENST00000046640 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 TET1Q8NFU7 2136 aa13.16□□□□□ -0.3
CTNS-201ENST00000046640 A0A1W2PQ45 241 aaPredicted RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 A0A1W2PQY0 241 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 A8MT66 165 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 TSPAN3O60637 253 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 NBNO60934 754 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 H2AFYO75367 372 aaKnown RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 SUPT7LO94864 414 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 VNN2O95498 520 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 IRF1P10914 325 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 C1QTNF8P60827 252 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 RP9Q8TA86 221 aaKnown RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 PDCD6IPQ8WUM4 868 aaKnown RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 FUBP3Q96I24 572 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTNS-201ENST00000046640 BTBD9Q96Q07 612 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 CCDC167Q9P0B6 97 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 RIMS3Q9UJD0 308 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 GJB5O95377 273 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 SLC6A4P31645 630 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 SCNN1BP51168 640 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 PTK2BQ14289 1009 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 SEMA3AQ14563 771 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 TRIP4Q15650 581 aaPredicted RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 MYO1HQ8N1T3 1032 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 LRTOMTQ8WZ04 291 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 TMIGD2Q96BF3 282 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 FAM210AQ96ND0 272 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 SLC39A3Q9BRY0 314 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 EFCAB1Q9HAE3 211 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTNS-201ENST00000046640 TSR3Q9UJK0 312 aaKnown RBP13.15□□□□□ -0.3
CTNS-201ENST00000046640 SNX13Q9Y5W8 968 aa13.15□□□□□ -0.3
CTNS-201ENST00000046640 UBA6A0AVT1 1052 aaPredicted RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 ENPP3O14638 875 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 LDB2O43679 373 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 SIX3O95343 332 aaPredicted RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 S1PR4O95977 384 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 GOT2P00505 430 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 ASLP04424 464 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 RPLP2P05387 115 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 LTA4HP09960 611 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 ATXN1LP0C7T5 689 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 COL6A2P12110 1019 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 RGRP47804 291 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 XIAPP98170 497 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 SULT2A1Q06520 285 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 SERINC3Q13530 473 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 TECRLQ5HYJ1 363 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 AGAP9Q5VTM2 703 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 C16orf59Q7L2K0 433 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 MARVELD2Q8N4S9 558 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 PPWD1Q96BP3 646 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 SCLYQ96I15 445 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 IL1RL2Q9HB29 575 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 MARCH5Q9NX47 278 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 GIMAP2Q9UG22 337 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 PTGDR2Q9Y5Y4 395 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 A0A087X1B8 175 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 SMIM31A0A1B0GVY4 71 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 FAM58BPP0C7Q3 252 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 TACR2P21452 398 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 PRDX6P30041 224 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 HTR7P34969 479 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 LEPRP48357 1165 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 NSUN2Q08J23 767 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTNS-201ENST00000046640 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 FUT10Q6P4F1 479 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 LRRC8DQ7L1W4 858 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 FAM110BQ8TC76 370 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 BCL7CQ8WUZ0 217 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms