RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SCD5Q86SK9 330 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 UBR7Q8N806 425 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 APBB2Q92870 758 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 VAT1Q99536 393 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 ACTR8Q9H981 624 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 TAS2R13Q9NYV9 303 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 WNT6Q9Y6F9 365 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 FOCADQ5VW36 1801 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 GJB3O75712 270 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SERPINA6P08185 405 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CNPP09543 421 aaKnown RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 TBCCQ15814 346 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 ZIK1Q3SY52 487 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SYTL3Q4VX76 610 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SETD3Q86TU7 594 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 OR4K2Q8NGD2 314 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 OSER1Q9NX31 292 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CROTQ9UKG9 612 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 IQCF5A8MTL0 148 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 ACSL4O60488 711 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CLPTM1O96005 669 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CA3P07451 260 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 TPSB2P20231 275 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 RANBP1P43487 201 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 TPSAB1Q15661 275 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 PGS1Q32NB8 556 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 PPP1R15BQ5SWA1 713 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 ANKS6Q68DC2 871 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 MARK2Q7KZI7 788 aaKnown RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 TDRPQ86YL5 185 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 PHTF2Q8N3S3 785 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 FIG4Q92562 907 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SIGLEC10Q96LC7 697 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 USP29Q9HBJ7 922 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 ARHGEF3Q9NR81 526 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 TRAV19A0A0A6YYK7 116 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 GABRDO14764 452 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 TBX10O75333 385 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 FKBP6O75344 327 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SEC24AO95486 1093 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 HLA-DQB2P05538 268 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 LTA4HP09960 611 aaKnown RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 HGFP14210 728 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 PSMC3P17980 439 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CRABP2P29373 138 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 LRRC23Q53EV4 343 aaPredicted RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 LZTR1Q8N653 840 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 SORCS1Q8WY21 1168 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 DNAJC1Q96KC8 554 aaKnown RBP12.08□□□□□ -0.48
CHPF2-201ENST00000035307 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CASD1Q96PB1 797 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 OR52B2Q96RD2 323 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 RTP3Q9BQQ7 232 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 HGH1Q9BTY7 390 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 RHOJQ9H4E5 214 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 CATSPERZQ9NTU4 200 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 GID8Q9NWU2 228 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 ZNF711Q9Y462 761 aa12.08□□□□□ -0.48
CHPF2-201ENST00000035307 FAM149AA5PLN7 773 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CLASP2O75122 1294 aaKnown RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 MAP4P27816 1152 aaKnown RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 LIPMQ5VYY2 423 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 PKN3Q6P5Z2 889 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 HERC6Q8IVU3 1022 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CLHC1Q8NHS4 586 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 RBBP8Q99708 897 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 OXCT2Q9BYC2 517 aaPredicted RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 TXLNGYQ9BZA5 131 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CDH19Q9H159 772 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 GIMAP2Q9UG22 337 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CD84Q9UIB8 345 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 VWA7Q9Y334 891 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 COCHO43405 550 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 UGT2B4P06133 528 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 ATP5F1P24539 256 aaPredicted RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 MZF1P28698 734 aaPredicted RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CDK7P50613 346 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 SLC7A2P52569 658 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 WASHC5Q12768 1159 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 IL27RAQ6UWB1 636 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 ARCQ7LC44 396 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 MRPL10Q7Z7H8 261 aaKnown RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 MIEF2Q96C03 454 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 THAP11Q96EK4 314 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 OLFM3Q96PB7 478 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 SLC22A12Q96S37 553 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 SLC39A3Q9BRY0 314 aa12.07□□□□□ -0.48
CHPF2-201ENST00000035307 SIX3O95343 332 aaPredicted RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 CPSF4O95639 269 aaKnown RBP12.07□□□□□ -0.48
CHPF2-201ENST00000035307 ZNF682O95780 498 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms