RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 EBF3Q9H4W6 596 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 ZNF576Q9H609 170 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 ATP13A3Q9H7F0 1226 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 EBF2Q9HAK2 575 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 ZFP14Q9HCL3 533 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 TREX1Q9NSU2 369 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 CLDND1Q9NY35 253 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 GDE1Q9NZC3 331 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 CDH7Q9ULB5 785 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 GRID1Q9ULK0 1009 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 FNDC3AQ9Y2H6 1198 aaKnown RBP8.89□□□□□ -0.99
PHGDH-219ENST00000641513 MTO1Q9Y2Z2 717 aaKnown RBP8.89□□□□□ -0.99
PHGDH-219ENST00000641513 KCTD3Q9Y597 815 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 PCDHB9Q9Y5E1 797 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 ARL5AQ9Y689 179 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 CHD7Q9P2D1 2997 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 ATG2BQ96BY7 2078 aa8.89□□□□□ -0.99
PHGDH-219ENST00000641513 TCF20Q9UGU0 1960 aaKnown RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 WDR91A4D1P6 747 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 C2orf81A6NN90 581 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TPP1O14773 563 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TRIM24O15164 1050 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TIMM44O43615 452 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 LDB2O43679 373 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 PAPSS2O95340 614 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 HOXB8P17481 243 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TYK2P29597 1187 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SERPINA4P29622 427 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 GKP32189 559 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 NNMTP40261 264 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 MAPK8P45983 427 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SERPINB8P50452 374 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 MPP1Q00013 466 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 KDSRQ06136 332 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 RAD51Q06609 339 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 CTBP1Q13363 440 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 PTPRCAPQ14761 206 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 KRT72Q14CN4 511 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 DLG2Q15700 870 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TBCCQ15814 346 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 CMPK2Q5EBM0 449 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 DGKKQ5KSL6 1271 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 WASHC2DQ5SRD0 308 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TANGO2Q6ICL3 276 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 C22orf39Q6P5X5 142 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TMEM184AQ6ZMB5 413 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 RAPH1Q70E73 1250 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 OTOAQ7RTW8 1153 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 PTAR1Q7Z6K3 402 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 DENND6AQ8IWF6 608 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 NDUFAF2Q8N183 169 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 DCLK2Q8N568 766 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 OR2AP1Q8NGE2 309 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TTC8Q8TAM2 541 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 BRSK1Q8TDC3 778 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 TCP10LQ8TDR4 215 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 STYXQ8WUJ0 223 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 CYB5D2Q8WUJ1 264 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 MYLIPQ8WY64 445 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 HDAC10Q969S8 669 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 DNAJC1Q96KC8 554 aaKnown RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 LMLNQ96KR4 655 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 RIPOR3Q96MK2 946 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SMIM14Q96QK8 99 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 GPR63Q9BZJ6 419 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 MMADHCQ9H3L0 296 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 FAM96AQ9H5X1 160 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 STN1Q9H668 368 aaKnown RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 ZDHHC6Q9H6R6 413 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 MANSC1Q9H8J5 431 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 FBXO6Q9NRD1 293 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 MARK1Q9P0L2 795 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SLC17A7Q9P2U7 560 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 HECAQ9UBI9 543 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SLC39A10Q9ULF5 831 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SLC8A2Q9UPR5 921 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 ERVW-1Q9UQF0 538 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 SPO11Q9Y5K1 396 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 LRRK1Q38SD2 2015 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 PLXNB3Q9ULL4 1909 aa8.88□□□□□ -0.99
PHGDH-219ENST00000641513 ANKRD12Q6UB98 2062 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PRRC2BQ5JSZ5 2229 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 CCDC162PA2VCL2 907 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 MROH6A6NGR9 719 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 OR51F1A6NGY5 319 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ANKRD66B4E2M5 251 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 AURKAO14965 403 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 STX7O15400 261 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 RFPL1O75677 317 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 RPP40O75818 363 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PGLSO95336 258 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PAPLNO95428 1278 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GSRP00390 522 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PRLP01236 227 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 LMNAP02545 664 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 LPOP22079 712 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 IGFBP4P22692 258 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SLC1A2P43004 574 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ARCN1P48444 511 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms