RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 RIPK1Q13546 671 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 CRY1Q16526 586 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 FRMD7Q6ZUT3 714 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 TMEM86AQ8N2M4 240 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 PPP1R13LQ8WUF5 828 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 AAASQ9NRG9 546 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 GSAPA4D1B5 854 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 CHP2O43745 196 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 FAM155BO75949 473 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 ZNF432O94892 652 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 TFEBP19484 476 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 TNFAIP8L3Q5GJ75 292 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 TCEAL5Q5H9L2 206 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 LDLRAP1Q5SW96 308 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 OSGEPL1Q9H4B0 414 aa17.27■□□□□ 0.36
HNRNPU-217ENST00000638952 TRMUO75648 421 aaKnown RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 THRBP10828 461 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 HNRNPLP14866 589 aaKnown RBP eCLIP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 PSEN2P49810 448 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 USP4Q13107 963 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 IL18Q14116 193 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 LACTB2Q53H82 288 aaPredicted RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 INTS11Q5TA45 600 aaKnown RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 RETSATQ6NUM9 610 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 C12orf29Q8N999 325 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 FAM47BQ8NA70 645 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 FAM13CQ8NE31 585 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 MRPL57Q9BQC6 102 aaKnown RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 PRDM12Q9H4Q4 367 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 OR5F1O95221 314 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 MYL4P12829 197 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 CLCN5P51795 746 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 ARF3P61204 181 aaPredicted RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 ARF1P84077 181 aaKnown RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 GNA13Q14344 377 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 LPCAT4Q643R3 524 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 TUBA3EQ6PEY2 450 aa17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 FAM126AQ9BYI3 521 aaPredicted RBP17.27■□□□□ 0.35
HNRNPU-217ENST00000638952 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 FADS2O95864 444 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 ITGB5P18084 799 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 ADSLP30566 484 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 PTPN5P54829 565 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 VBP1P61758 197 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 BIKQ13323 160 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 DGKZQ13574 1117 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 GRPEL2Q8TAA5 225 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 MCOLN3Q8TDD5 553 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 REPS1Q96D71 796 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 RPL26L1Q9UNX3 145 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 HDAC3O15379 428 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 B4GALT5O43286 388 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 HOXB8P17481 243 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 BNIP2Q12982 314 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 ATP13A5Q4VNC0 1218 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 STXBP5Q5T5C0 1151 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 XPR1Q9UBH6 696 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 TDRKHQ9Y2W6 561 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 DCCP43146 1447 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 CASKO14936 926 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 C9P02748 559 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 COPZ1P61923 177 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 SLC1A5Q15758 541 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 RDH11Q8TC12 318 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 TDRD1Q9BXT4 1180 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 MED28Q9H204 178 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 ARL15Q9NXU5 204 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 MTAPQ13126 283 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 CTBP1Q13363 440 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 CRTC3Q6UUV7 619 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 NAT14Q8WUY8 206 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 ZC3H10Q96K80 434 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 CCDC3Q9BQI4 270 aa17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 PDGFDQ9GZP0 370 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-217ENST00000638952 AGPSO00116 658 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 GSC2O15499 205 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 TOP3BO95985 862 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 BPGMP07738 259 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 CYP4B1P13584 511 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 FAUP35544 74 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 CMC1Q7Z7K0 106 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 PIGZQ86VD9 579 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 GAD1Q99259 594 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 TOR3AQ9H497 397 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 ABCB9Q9NP78 766 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 PCDHGA10Q9Y5H3 936 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 UMODL1Q5DID0 1318 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 PTPRAP18433 802 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 ACADLP28330 430 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 JAM2P57087 298 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 BCL2L1Q07817 233 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 GCNT7Q6ZNI0 430 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 NPAS2Q99743 824 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.25■□□□□ 0.353e-9■■□□□ 11.9
HNRNPU-217ENST00000638952 KANSL3Q9P2N6 904 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 SNX7Q9UNH6 387 aa17.25■□□□□ 0.35
HNRNPU-217ENST00000638952 DHRS7Q9Y394 339 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms