RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 AGGF1Q8N302 714 aaeCLIP5.54□□□□□ -1.52
CHD2-227ENST00000637572 TCAIMQ8N3R3 496 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TTC30BQ8N4P2 665 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PEX13Q92968 403 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CD101Q93033 1021 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 KCTD12Q96CX2 325 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 TRMT2BQ96GJ1 504 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 ZNF514Q96K75 400 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 DMRTB1Q96MA1 342 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 KLHL5Q96PQ7 755 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MRPL57Q9BQC6 102 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 ZNF576Q9H609 170 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CSNK1G1Q9HCP0 422 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SOX13Q9UN79 622 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TCAF1Q9Y4C2 921 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ZNF840PA6NDX5 716 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 FZD6O60353 706 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 FAM153BP0C7A2 387 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ATP5F1P24539 256 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 IL1R2P27930 398 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PTGIRP43119 386 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 NRIP1P48552 1158 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ECT2LQ008S8 904 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 FAM153CQ494X1 144 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 GPR33Q49SQ1 333 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 AASDHQ4L235 1098 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 CARD16Q5EG05 197 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 RTP2Q5QGT7 225 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 DAB2IPQ5VWQ8 1189 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 KIAA0930Q6ICG6 404 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 LPCAT2Q7L5N7 544 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PIWIL4Q7Z3Z4 852 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 UMODL1-AS1Q8N2C9 162 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 UBR7Q8N806 425 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 C1orf216Q8TAB5 229 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 DIS3LQ8TF46 1054 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 B3GALT6Q96L58 329 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 WDR41Q9HAD4 459 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 SSU72Q9NP77 194 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 NPHS2Q9NP85 383 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CASS4Q9NQ75 786 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CLDND1Q9NY35 253 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 POLG2Q9UHN1 485 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PFDN2Q9UHV9 154 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 FER1L6Q2WGJ9 1857 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TCRBV9S1A1TA0A576 114 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PRR23AA6NEV1 266 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PDZK1P1A8MUH7 402 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TMEM229AB2RXF0 380 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TMEM114B3SHH9 223 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TULP2O00295 520 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 GNGT2O14610 69 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CFLARO15519 480 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 KDELR3O43731 214 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MLYCDO95822 493 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CXCL10P02778 98 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CD48P09326 243 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SUOXP51687 545 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 KCNK10P57789 538 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SKOR1P84550 965 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TAF11Q15544 211 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TAF1AQ15573 450 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 SNCBQ16143 134 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 INO80DQ53TQ3 878 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 TMTC4Q5T4D3 741 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 LHX8Q68G74 356 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 RAET1GQ6H3X3 334 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 KIAA1324Q6UXG2 1013 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.54□□□□□ -1.52
CHD2-227ENST00000637572 GPSM1Q86YR5 675 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ARID3BQ8IVW6 561 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 PYROXD2Q8N2H3 581 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 OR7D4Q8NG98 312 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PRICKLE1Q96MT3 831 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 TUBGCP5Q96RT8 1024 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 NLNQ9BYT8 704 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 NSUN3Q9H649 340 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 SYBUQ9NX95 663 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MTMR10Q9NXD2 777 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SORCS3Q9UPU3 1222 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 USP3Q9Y6I4 520 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 A0A088AWK7 358 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 GLYATL1P3A0A0U1RQE8 302 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ITGA2BP08514 1039 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ERVK-10P10266 1014 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ITGB6P18564 788 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ZNF10P21506 573 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 GRIA4P48058 902 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 GATMP50440 423 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MAXP61244 160 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 RELBQ01201 579 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 NRG1Q02297 640 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 PTK2BQ14289 1009 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 CYP2A13Q16696 494 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MUM1Q2TAK8 710 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ARSJQ5FYB0 599 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 TXNDC8Q6A555 127 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 WDTC1Q8N5D0 677 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms