RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SGSM3Q96HU1 749 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 HEPHQ9BQS7 1158 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 MCMBPQ9BTE3 642 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 SUV39H2Q9H5I1 410 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 ZDHHC6Q9H6R6 413 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 BRD9Q9H8M2 597 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 PHTF1Q9UMS5 762 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 ZNF711Q9Y462 761 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 ARL5AQ9Y689 179 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 ANKRD36A6QL64 1941 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 MYOFQ9NZM1 2061 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 EDDM13A0A1B0GTR0 161 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 GRXCR2A6NFK2 248 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 TTC34A8MYJ7 566 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 TRIM49D1C9J1S8 452 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 PRRT4C9JH25 899 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 H7C0S8 307 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 UGT1A9O60656 530 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 MT-ND3P03897 115 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 APODP05090 189 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 PRKCGP05129 697 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 CCNFP41002 786 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 SLC6A11P48066 632 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 HNRNPA1L2Q32P51 320 aaKnown RBP15.39■□□□□ 0.05
CLN6-219ENST00000637329 FNDC3BQ53EP0 1204 aaKnown RBP15.39■□□□□ 0.05
CLN6-219ENST00000637329 NEPROQ6NW34 567 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 AFTPHQ6ULP2 937 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 GDPD4Q6W3E5 623 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 USP45Q70EL2 814 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 STRA8Q7Z7C7 330 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 TTC30BQ8N4P2 665 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 C2CD4AQ8NCU7 369 aaPredicted RBP15.39■□□□□ 0.05
CLN6-219ENST00000637329 GPR150Q8NGU9 434 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 ACMSDQ8TDX5 336 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 CSGALNACT1Q8TDX6 532 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 PTPRN2Q92932 1015 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 DNAJC1Q96KC8 554 aaKnown RBP15.39■□□□□ 0.05
CLN6-219ENST00000637329 MCCC1Q96RQ3 725 aaPredicted RBP15.39■□□□□ 0.05
CLN6-219ENST00000637329 SELENOSQ9BQE4 189 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 RHOJQ9H4E5 214 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 UGT1A7Q9HAW7 530 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 UGT1A10Q9HAW8 530 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 UGT1A8Q9HAW9 530 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 IARS2Q9NSE4 1012 aaKnown RBP15.39■□□□□ 0.05
CLN6-219ENST00000637329 GTSE1Q9NYZ3 720 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 IL1RAPL1Q9NZN1 696 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 IL36AQ9UHA7 158 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 GGT7Q9UJ14 662 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 ADAM21Q9UKJ8 722 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 PSAT1Q9Y617 370 aa15.39■□□□□ 0.05
CLN6-219ENST00000637329 ZNF106Q9H2Y7 1883 aaKnown RBP15.38■□□□□ 0.05
CLN6-219ENST00000637329 TMEM120BA0PK00 339 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 CCDC78A2IDD5 438 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 FAM47DPA6NHR8 397 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 H3BQ06 376 aaPredicted RBP15.38■□□□□ 0.05
CLN6-219ENST00000637329 MBTPS2O43462 519 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 KAT7O95251 611 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 ITGA2BP08514 1039 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 PIRTP0C851 137 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 OGNP20774 298 aaKnown RBP15.38■□□□□ 0.05
CLN6-219ENST00000637329 HMGCLP35914 325 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 SLC1A2P43004 574 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 POLD2P49005 469 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 SERPINB8P50452 374 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 POLR2LP62875 67 aaKnown RBP15.38■□□□□ 0.05
CLN6-219ENST00000637329 CBX1P83916 185 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 ZNF470Q6ECI4 717 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 MRNIPQ6NTE8 343 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 GJD3Q8N144 294 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 PAF1Q8N7H5 531 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 MDGA1Q8NFP4 955 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 SORCS1Q8WY21 1168 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 DNASE1L2Q92874 299 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 CHFRQ96EP1 664 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 APOPT1Q96IL0 206 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 AGAP2Q99490 1192 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 POLR3BQ9NW08 1133 aaPredicted RBP15.38■□□□□ 0.05
CLN6-219ENST00000637329 SLC17A6Q9P2U8 582 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 DKK3Q9UBP4 350 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 CORO1CQ9ULV4 474 aaPredicted RBP15.38■□□□□ 0.05
CLN6-219ENST00000637329 PKP3Q9Y446 797 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 WASF2Q9Y6W5 498 aa15.38■□□□□ 0.05
CLN6-219ENST00000637329 TBC1D3BA6NDS4 549 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 TYROBPO43914 113 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 SHOX2O60902 331 aaPredicted RBP15.37■□□□□ 0.05
CLN6-219ENST00000637329 ZWINTO95229 277 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 PRNPP04156 253 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 UGT2B4P06133 528 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 KRT4P19013 534 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 KCNA5P22460 613 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 GKP32189 559 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 MAGEA12P43365 314 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 CD151P48509 253 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 ATP1A2P50993 1020 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 SLC18A2Q05940 514 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 GABPB1Q06547 395 aaPredicted RBP15.37■□□□□ 0.05
CLN6-219ENST00000637329 MESP2Q0VG99 397 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 ELAVL3Q14576 367 aaKnown RBP15.37■□□□□ 0.05
CLN6-219ENST00000637329 ZNF234Q14588 700 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms