RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CCDC170Q8IYT3 715 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 FAM181AQ8N9Y4 354 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 LRRN4Q8WUT4 740 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 MAML1Q92585 1016 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 GLMNQ92990 594 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 TCEAL2Q9H3H9 227 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 USP29Q9HBJ7 922 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 AMACRQ9UHK6 382 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 OR1A2Q9Y585 309 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 HEY1Q9Y5J3 304 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 ANKRD11Q6UB99 2663 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 KIF26BQ2KJY2 2108 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 TRABD2BA6NFA1 517 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 ZNF487B1APH4 448 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 TPP1O14773 563 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 TNFP01375 233 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 MYF5P13349 255 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 CTPS1P17812 591 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 CA4P22748 312 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 CLDN6P56747 220 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 DSC2Q02487 901 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 AP1B1Q10567 949 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 SLC10A2Q12908 348 aaPredicted RBP13.84□□□□□ -0.19
PNKP-228ENST00000637325 TCEAL1Q15170 157 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 ELOCQ15369 112 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 CNGA3Q16281 694 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 VSIG1Q86XK7 387 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 PDCD7Q8N8D1 485 aaKnown RBP13.84□□□□□ -0.19
PNKP-228ENST00000637325 TPCN2Q8NHX9 752 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 SCG3Q8WXD2 468 aaKnown RBP13.84□□□□□ -0.19
PNKP-228ENST00000637325 SPOCK2Q92563 424 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 FATE1Q969F0 183 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
PNKP-228ENST00000637325 HDAC11Q96DB2 347 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 NUS1Q96E22 293 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 MRFAP1L1Q96HT8 127 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 TBATAQ96M53 351 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 WDR92Q96MX6 357 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 KCTD5Q9NXV2 234 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 DTLQ9NZJ0 730 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 NCKIPSDQ9NZQ3 722 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 SALL4Q9UJQ4 1053 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 PCDHA13Q9Y5I0 950 aa13.84□□□□□ -0.19
PNKP-228ENST00000637325 CPED1A4D0V7 1026 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 GOLGA6CA6NDK9 693 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 GOLGA6BA6NDN3 693 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 GCATO75600 419 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 KRT37O76014 449 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 HEXIM1O94992 359 aaKnown RBP13.83□□□□□ -0.2
PNKP-228ENST00000637325 IPO7O95373 1038 aaKnown RBP13.83□□□□□ -0.2
PNKP-228ENST00000637325 JCHAINP01591 159 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 ALPIP09923 528 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 GOLGA6DP0CG33 693 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 KELP23276 732 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 RPIAP49247 311 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 HK3P52790 923 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 SRP54P61011 504 aaKnown RBP13.83□□□□□ -0.2
PNKP-228ENST00000637325 DYNLT1P63172 113 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 PDK1Q15118 436 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 TCEA2Q15560 299 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 CDKN3Q16667 212 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 PNCKQ6P2M8 343 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 FSTL5Q8N475 847 aaPredicted RBP13.83□□□□□ -0.2
PNKP-228ENST00000637325 PLA2G15Q8NCC3 412 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 SCRN2Q96FV2 425 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 LGMNQ99538 433 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 LRRC61Q9BV99 259 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 ABCG4Q9H172 646 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 GOLGA6AQ9NYA3 693 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 MOSPD1Q9UJG1 213 aa13.83□□□□□ -0.2
PNKP-228ENST00000637325 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
PNKP-228ENST00000637325 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 C3orf70A6NLC5 250 aaPredicted RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 LMO7DNF2Z398 122 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 PSMD11O00231 422 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 PSTPIP1O43586 416 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 LCA5LO95447 670 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 HLA-DQB2P05538 268 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 PDHA1P08559 390 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 TSHRP16473 764 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 KIAA1024LP59773 190 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 INSM1Q01101 510 aaPredicted RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 PPIDQ08752 370 aaKnown RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 TARDBPQ13148 414 aaKnown RBP eCLIP13.82□□□□□ -0.2
PNKP-228ENST00000637325 NR0B2Q15466 257 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 ALG11Q2TAA5 492 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 SLC9A4Q6AI14 798 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 ESRP1Q6NXG1 681 aaKnown RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 GKN2Q86XP6 184 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 TMTC1Q8IUR5 882 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 PLD5Q8N7P1 536 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 MDM1Q8TC05 714 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms