RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 RHBDF2Q6PJF5 856 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 MON1BQ7L1V2 547 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 GALNT7Q86SF2 657 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 ADGRG6Q86SQ4 1221 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 MOGAT3Q86VF5 341 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 WDR5BQ86VZ2 330 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 DCUN1D3Q8IWE4 304 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 BRSK2Q8IWQ3 736 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 SUGP1Q8IWZ8 645 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CPXCR1Q8N123 301 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 RFLNBQ8N5W9 214 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 SCAIQ8N9R8 606 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CLEC18CQ8NCF0 446 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 GABPB2Q8TAK5 448 aaPredicted RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 STT3BQ8TCJ2 826 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 C2CD4CQ8TF44 421 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 TBC1D22AQ8WUA7 517 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC35F5Q8WV83 523 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 THAP4Q8WY91 577 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 HSPH1Q92598 858 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 KIF1BPQ96EK5 621 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 P2RY11Q96G91 374 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 ZC3HAV1LQ96H79 300 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF333Q96JL9 665 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CLMNQ96JQ2 1002 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 DUX5Q96PT3 197 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CD180Q99467 661 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 PKP4Q99569 1192 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 PYM1Q9BRP8 204 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 NUF2Q9BZD4 464 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 B3GNT4Q9C0J1 378 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CTDSP1Q9GZU7 261 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 MROH8Q9H579 483 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 TTC12Q9H892 705 aaPredicted RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 DDX31Q9H8H2 851 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 Q9N2J8 555 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 RIC8AQ9NPQ8 531 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 TLR8Q9NR97 1041 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 TMEM248Q9NWD8 314 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 BABAM1Q9NWV8 329 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 OCIAD1Q9NX40 245 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 UPB1Q9UBR1 384 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CTNNAL1Q9UBT7 734 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 FEM1BQ9UK73 627 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 LZTS1Q9Y250 596 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CNPY2Q9Y2B0 182 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 DNAJC16Q9Y2G8 782 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 PAM16Q9Y3D7 125 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 SMAD5-AS1Q9Y6J3 95 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC4A4Q9Y6R1 1079 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CICQ96RK0 1608 aaPredicted RBP1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 CASP8AP2Q9UKL3 1982 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 TMEM94Q12767 1356 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 PNPLA6Q8IY17 1366 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 LTBP1Q14766 1721 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 ATP7BP35670 1465 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 MYH1P12882 1939 aa1.17□□□□□ -2.22
SMARCB1-209ENST00000635578 COL4A1P02462 1669 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 SPAG9O60271 1321 aaKnown RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 RBBP6Q7Z6E9 1792 aaKnown RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 NFAT5O94916 1531 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ABCC6O95255 1503 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 THSD7BQ9C0I4 1608 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 A0A0A0MQY5 61 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 C17orf102A2RUQ5 167 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM90A20PA6NIJ5 464 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 SH2D7A6NKC9 451 aaPredicted RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 B9A039 149 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM157AC9JC47 383 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 MS4A18H0YCH9 400 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 EIF3FO00303 357 aaPredicted RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 IFRD1O00458 451 aaPredicted RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 VWA5AO00534 786 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 HSPB6O14558 160 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ASAP2O43150 1006 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 CEP104O60308 925 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 PIP5K1CO60331 668 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 SERPINI2O75830 405 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 MTA2O94776 668 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 BAG4O95429 457 aaKnown RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 METTL18O95568 372 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 KLKB1P03952 638 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 WNT1P04628 370 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 POLBP06746 335 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 CYP21A2P08686 494 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 IFIT1P09914 478 aaKnown RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF883P0CG24 379 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ENO3P13929 434 aaPredicted RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC2A4P14672 509 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ARSAP15289 507 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ARSBP15848 533 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF12P17014 697 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 XBP1P17861 261 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 IGFBP2P18065 325 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 YWHAQP27348 245 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 POU1F1P28069 291 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 AVPR2P30518 371 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 HNF1BP35680 557 aa1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 RPL3P39023 403 aaKnown RBP1.16□□□□□ -2.22
SMARCB1-209ENST00000635578 PAFAH1B1P43034 410 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms