RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RAPH1Q70E73 1250 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 RALGPS2Q86X27 583 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC44A1Q8WWI5 657 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 RILPQ96NA2 401 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 SPATA6Q9NWH7 488 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZFATQ9P243 1243 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 C1orf232A0A0U1RR37 186 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 WDR91A4D1P6 747 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 ADRA1DP25100 572 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MPP7Q5T2T1 576 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 OTUD1Q5VV17 481 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 CRLF3Q8IUI8 442 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 HDDC3Q8N4P3 179 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MYLK2Q9H1R3 596 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 C20orf96Q9NUD7 363 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 NSMCE4AQ9NXX6 385 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 ACTL7AQ9Y615 435 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 EDDM13A0A1B0GTR0 161 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 HMX2A2RU54 273 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 CHUKO15111 745 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 HLA-DQB2P05538 268 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 LTBRP36941 435 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 TMEM184AQ6ZMB5 413 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 STK40Q8N2I9 435 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 PCDH20Q8N6Y1 951 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 LRRC3Q9BY71 257 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 WASH3PC4AMC7 463 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 DRD1P21728 446 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 CES1P23141 567 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 CTSOP43234 321 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 SERPINH1P50454 418 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 AP1S1P61966 158 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 CRADDP78560 199 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 LEXMQ3ZCV2 418 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC25A51Q9H1U9 297 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 A8MUI8 341 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 HGSO14964 777 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MOSPD3O75425 235 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 UNC5CO95185 931 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 PRKCGP05129 697 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MGAT1P26572 445 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 NTSR1P30989 418 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC8A1P32418 973 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 RFTN1Q14699 578 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 GRM3Q14832 879 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MLF2Q15773 248 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 TBC1D1Q86TI0 1168 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 RPLP0P6Q8NHW5 317 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 TCP10LQ8TDR4 215 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MCUR1Q96AQ8 359 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 LRRC37BQ96QE4 947 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 BPIFA1Q9NP55 256 aa12.51□□□□□ -0.41
SYNGAP1-207ENST00000628646 MKI67P46013 3256 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 NUP205Q92621 2012 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 CXorf49A8MYA2 514 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 NARSO43776 548 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 NDUFS3O75489 264 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 SRFP11831 508 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 MAT2AP31153 395 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 GTF2H3Q13889 308 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 SNCBQ16143 134 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 FBXO43Q4G163 708 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF783Q6ZMS7 281 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 NUDCD3Q8IVD9 361 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC7A6OSQ96CW6 309 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 NELL2Q99435 816 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 WRAP53Q9BUR4 548 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 KCNK13Q9HB14 408 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 NOD2Q9HC29 1040 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 MYO10Q9HD67 2058 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 DRGXA6NNA5 263 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 ERI2A8K979 691 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 HNRNPCL1O60812 293 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 PIGNO95427 931 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 HTR4Q13639 388 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 SMAD2Q15796 467 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 DPY19L3Q6ZPD9 716 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 CDHR3Q6ZTQ4 885 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 WDR75Q8IWA0 830 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 PIP4K2CQ8TBX8 421 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 AASDHPPTQ9NRN7 309 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 VPS45Q9NRW7 570 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 RAB23Q9ULC3 237 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 STON1Q9Y6Q2 735 aa12.5□□□□□ -0.41
SYNGAP1-207ENST00000628646 E5RI56 91 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms