RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PES1O00541 588 aaKnown RBP14.73□□□□□ -0.05
PNKP-218ENST00000625299 ZW10O43264 779 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 CREB3O43889 395 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 BUB1BO60566 1050 aaPredicted RBP14.73□□□□□ -0.05
PNKP-218ENST00000625299 RAD1O60671 282 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 PRKAR1AP10644 381 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 PRKCSHP14314 528 aaPredicted RBP14.73□□□□□ -0.05
PNKP-218ENST00000625299 CSTF2P33240 577 aaKnown RBP eCLIP14.73□□□□□ -0.05
PNKP-218ENST00000625299 HDAC4P56524 1084 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 SERINC3Q13530 473 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 GRM3Q14832 879 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 MAN2A1Q16706 1144 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 TSR1Q2NL82 804 aaKnown RBP14.73□□□□□ -0.05
PNKP-218ENST00000625299 SMYD5Q6GMV2 418 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 STRADAQ7RTN6 431 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 FAM129CQ86XR2 697 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 NRSN1Q8IZ57 195 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 HCAR2Q8TDS4 363 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 ZNF641Q96N77 438 aaPredicted RBP14.73□□□□□ -0.05
PNKP-218ENST00000625299 SLC39A1Q9NY26 324 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 TUBD1Q9UJT1 453 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 ANAPC2Q9UJX6 822 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 MAN2B2Q9Y2E5 1009 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 PCDHGA3Q9Y5H0 932 aa14.73□□□□□ -0.05
PNKP-218ENST00000625299 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 TNFRSF10CO14798 259 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 NKX2-8O15522 239 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 ECEL1O95672 775 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 CCNB1P14635 433 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 AK4P27144 223 aaPredicted RBP14.72□□□□□ -0.05
PNKP-218ENST00000625299 CD1CP29017 333 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 PTPN9P43378 593 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 GNPDA1P46926 289 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 YBEYP58557 167 aaPredicted RBP14.72□□□□□ -0.05
PNKP-218ENST00000625299 ILF3Q12906 894 aaKnown RBP eCLIP14.72□□□□□ -0.05
PNKP-218ENST00000625299 RALGDSQ12967 914 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 ACOX1Q15067 660 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 PARP15Q460N3 678 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 C4orf17Q53FE4 359 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 HSP90AA4PQ58FG1 418 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 SCYL2Q6P3W7 929 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 SLC30A9Q6PML9 568 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 SLFN11Q7Z7L1 901 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 PELI3Q8N2H9 469 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 FAM26EQ8N5C1 309 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 AGBL5Q8NDL9 886 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 EPS8L1Q8TE68 723 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 SLC20A1Q8WUM9 679 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 PATE1Q8WXA2 126 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 CATSPER2Q96P56 530 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 GSDMCQ9BYG8 508 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 CDH19Q9H159 772 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 ATP13A3Q9H7F0 1226 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 TAAR2Q9P1P5 351 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 PLAAQ9Y263 795 aa14.72□□□□□ -0.05
PNKP-218ENST00000625299 SPTAN1Q13813 2472 aaKnown RBP14.72□□□□□ -0.05
PNKP-218ENST00000625299 USP9YO00507 2555 aaPredicted RBP14.71□□□□□ -0.05
PNKP-218ENST00000625299 BLACEA4D250 179 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 EFCAB7A8K855 629 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 J3KR12 359 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 DUX1O43812 170 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 FGF1P05230 155 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 SERPINA4P29622 427 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 STAT1P42224 750 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 RGRP47804 291 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 LIMK2P53671 638 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 VWA3BQ502W6 1294 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 KLHDC7AQ5VTJ3 777 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 DPY19L2P1Q6NXN4 242 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 PNCKQ6P2M8 343 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 LIPIQ6XZB0 460 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 ZNF438Q7Z4V0 828 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 NRROSQ86YC3 692 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 NTAN1Q96AB6 310 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 TUBGCP5Q96RT8 1024 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 DDA1Q9BW61 102 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 NDST4Q9H3R1 872 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 CATSPERBQ9H7T0 1116 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 GPN2Q9H9Y4 310 aaPredicted RBP14.71□□□□□ -0.05
PNKP-218ENST00000625299 OCIAD1Q9NX40 245 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 TMEM9Q9P0T7 183 aa14.71□□□□□ -0.05
PNKP-218ENST00000625299 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 GOLGA6BA6NDN3 693 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 F8VZ95 297 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 PDE2AO00408 941 aaPredicted RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 HOXC4P09017 264 aaPredicted RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 KRT3P12035 628 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 MYCLP1P12525 358 aaPredicted RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 GPD1P21695 349 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 MMP8P22894 467 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 CSF2RBP32927 897 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 TRA2AQ13595 282 aaKnown RBP eCLIP14.7□□□□□ -0.06
PNKP-218ENST00000625299 NR1D2Q14995 579 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 CLPPQ16740 277 aaPredicted RBP14.7□□□□□ -0.06
PNKP-218ENST00000625299 DCAF12Q5T6F0 453 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 DENND2CQ68D51 928 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 ANKS6Q68DC2 871 aa14.7□□□□□ -0.06
PNKP-218ENST00000625299 SRLQ86TD4 932 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms