RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 LIG3P49916 1009 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 KRT85P78386 507 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 POLD3Q15054 466 aaPredicted RBP13.93□□□□□ -0.18
SNX1-214ENST00000625244 RESP18Q5W5W9 173 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 JMJD6Q6NYC1 403 aaPredicted RBP13.93□□□□□ -0.18
SNX1-214ENST00000625244 LRRC31Q6UY01 552 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 ARHGAP22Q7Z5H3 698 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 NAGSQ8N159 534 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 HMCESQ96FZ2 354 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 SLC25A23Q9BV35 468 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 TWSG1Q9GZX9 223 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 WDCPQ9H6R7 721 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
SNX1-214ENST00000625244 MLXIPLQ9NP71 852 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 RRN3Q9NYV6 651 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 ANKHD1Q8IWZ3 2542 aaKnown RBP13.93□□□□□ -0.18
SNX1-214ENST00000625244 PRSS38A1L453 326 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 PIPSLA2A3N6 862 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 INPP4BO15327 924 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 CXCR3P49682 368 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 ELP6Q0PNE2 266 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 PDCLQ13371 301 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 AGERQ15109 404 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 CPZQ66K79 652 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 ZNF761Q86XN6 746 aaPredicted RBP13.92□□□□□ -0.18
SNX1-214ENST00000625244 XYLT1Q86Y38 959 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 DRC7Q8IY82 874 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 GUF1Q8N442 669 aaKnown RBP13.92□□□□□ -0.18
SNX1-214ENST00000625244 NETO2Q8NC67 525 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 NT5C1BQ96P26 610 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 MFRPQ9BY79 579 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 PCDH12Q9NPG4 1184 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 PCDHA7Q9UN72 937 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 ST14Q9Y5Y6 855 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 SVILO95425 2214 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 ANKRD36A6QL64 1941 aa13.92□□□□□ -0.18
SNX1-214ENST00000625244 CROCCQ5TZA2 2017 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 POLR1CO15160 346 aaPredicted RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 CETN3O15182 167 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 CREG1O75629 220 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 FUCA1P04066 466 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 HOXC4P09017 264 aaPredicted RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 KELP23276 732 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 STAT1P42224 750 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 CHAF1BQ13112 559 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 ZXDCQ2QGD7 858 aaPredicted RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 ZRANB3Q5FWF4 1079 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 EFHC1Q5JVL4 640 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 BRMS1LQ5PSV4 323 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 SP5Q6BEB4 398 aaPredicted RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 SLC30A9Q6PML9 568 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 PELI3Q8N2H9 469 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 GALNT6Q8NCL4 622 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 C1orf74Q96LT6 269 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 CPXM1Q96SM3 734 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 GSDMCQ9BYG8 508 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 ULBP3Q9BZM4 244 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 CARS2Q9HA77 564 aaKnown RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 METTL14Q9HCE5 456 aaKnown RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 SLAMF7Q9NQ25 335 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 NDFIP2Q9NV92 336 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 ITGB1BP2Q9UKP3 347 aa13.91□□□□□ -0.18
SNX1-214ENST00000625244 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
SNX1-214ENST00000625244 CXorf51AA0A1B0GTR3 108 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 A6NCN8 305 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 INSIG1O15503 277 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
SNX1-214ENST00000625244 TRIM23P36406 574 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 NOP2P46087 812 aaKnown RBP13.9□□□□□ -0.18
SNX1-214ENST00000625244 ME1P48163 572 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 SUOXP51687 545 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 GPLD1P80108 840 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 ILF3Q12906 894 aaKnown RBP eCLIP13.9□□□□□ -0.187e-7■■■■□ 23.2
SNX1-214ENST00000625244 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.18
SNX1-214ENST00000625244 C6orf15Q6UXA7 325 aaPredicted RBP13.9□□□□□ -0.18
SNX1-214ENST00000625244 FAM183BPQ6ZVS7 135 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 ARHGEF19Q8IW93 802 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 WDTC1Q8N5D0 677 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 RANBP9Q96S59 729 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 SCAND2PQ9GZW5 306 aaPredicted RBP13.9□□□□□ -0.18
SNX1-214ENST00000625244 ACP6Q9NPH0 428 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
SNX1-214ENST00000625244 DOCK4Q8N1I0 1966 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 DIAPH2O60879 1101 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 DAB1O75553 588 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
SNX1-214ENST00000625244 PIGNO95427 931 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
SNX1-214ENST00000625244 CCL11P51671 97 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 RAPGEF1Q13905 1077 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 MEA1Q16626 185 aa13.89□□□□□ -0.19
SNX1-214ENST00000625244 UGP2Q16851 508 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms