RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 FSTL5Q8N475 847 aaPredicted RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 RFWD2Q8NHY2 731 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 DNAJC1Q96KC8 554 aaKnown RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 TBATAQ96M53 351 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 HTATIP2Q9BUP3 242 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 SLC2A11Q9BYW1 496 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 DRC3Q9H069 523 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 LRMDAQ9H2I8 198 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 MAN1C1Q9NR34 630 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 FBXO6Q9NRD1 293 aaPredicted RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 CXXC1Q9P0U4 656 aaPredicted RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 VTI1BQ9UEU0 232 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 ARL5AQ9Y689 179 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 GRM6O15303 877 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 STX7O15400 261 aaKnown RBP16.38■□□□□ 0.21
LDB3-208ENST00000623007 CCL16O15467 120 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 PHGDHO43175 533 aaKnown RBP16.38■□□□□ 0.21
LDB3-208ENST00000623007 FZD6O60353 706 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 CD160O95971 181 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 PRLP01236 227 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 PYGLP06737 847 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 SERPINA6P08185 405 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 CALB2P22676 271 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 NFKBIAP25963 317 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 WEE1P30291 646 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 RGRP47804 291 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 SUOXP51687 545 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 PTPN5P54829 565 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 ADARP55265 1226 aaKnown RBP16.38■□□□□ 0.21
LDB3-208ENST00000623007 SNRPD1P62314 119 aaKnown RBP16.38■□□□□ 0.21
LDB3-208ENST00000623007 RAD51Q06609 339 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 PRKAA1Q13131 559 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 DLG2Q15700 870 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 PLEKHG6Q3KR16 790 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 FSCBQ5H9T9 825 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 METTL21CQ5VZV1 264 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 CNSTQ6PJW8 725 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 MTDHQ86UE4 582 aaKnown RBP16.38■□□□□ 0.21
LDB3-208ENST00000623007 CENPLQ8N0S6 344 aaPredicted RBP16.38■□□□□ 0.21
LDB3-208ENST00000623007 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.38■□□□□ 0.21
LDB3-208ENST00000623007 LPCAT1Q8NF37 534 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 SH3RF2Q8TEC5 729 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 UBXN10Q96LJ8 280 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 ATP13A3Q9H7F0 1226 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 ARHGEF3Q9NR81 526 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 TDP1Q9NUW8 608 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 HAO1Q9UJM8 370 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 RAP2CQ9Y3L5 183 aa16.38■□□□□ 0.21
LDB3-208ENST00000623007 CCDC162PA2VCL2 907 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 LINC01553A4QN01 128 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 SNAP91O60641 907 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 SERPINA4P29622 427 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 ARSDP51689 593 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 AQP5P55064 265 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 ZXDBP98169 803 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 IRF9Q00978 393 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 BCL2L1Q07817 233 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 GALNT1Q10472 559 aaPredicted RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 SF3A3Q12874 501 aaKnown RBP eCLIP16.37■□□□□ 0.21
LDB3-208ENST00000623007 SMAD1Q15797 465 aaKnown RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 CFAP157Q5JU67 520 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 LYPLAL1Q5VWZ2 237 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 ASRGL1Q7L266 308 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 PLPP6Q8IY26 295 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 EFHBQ8N7U6 833 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 SHKBP1Q8TBC3 707 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 KCTD4Q8WVF5 259 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 THOC1Q96FV9 657 aaKnown RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 MYO19Q96H55 970 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 CNDP1Q96KN2 507 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 ASB2Q96Q27 587 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 TRMOQ9BU70 441 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 EML4Q9HC35 981 aaKnown RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 SLC25A13Q9UJS0 675 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 TMCO1Q9UM00 188 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 HS3ST2Q9Y278 367 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 DNAJC16Q9Y2G8 782 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 TARM1B6A8C7 271 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 NDUFS3O75489 264 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 PGLSO95336 258 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 TOP3BO95985 862 aaKnown RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 RHOP08100 348 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 NQO1P15559 274 aaKnown RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 FDXRP22570 491 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 SERPINB3P29508 390 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 HMGCLP35914 325 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 MNAT1P51948 309 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 RCN2Q14257 317 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 TTC31Q49AM3 519 aaPredicted RBP16.37■□□□□ 0.21
LDB3-208ENST00000623007 ZDHHC20Q5W0Z9 365 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 UGT3A1Q6NUS8 523 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 CEP97Q8IW35 865 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 HOMEZQ8IX15 550 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 OR4K2Q8NGD2 314 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 FAR2Q96K12 515 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 RILPQ96NA2 401 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 GPR78Q96P69 363 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 TAS2R13Q9NYV9 303 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 XPR1Q9UBH6 696 aa16.37■□□□□ 0.21
LDB3-208ENST00000623007 GOLGA8QA0A0J9YX86 632 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms