RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 CCBE1Q6UXH8 406 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 PPHLN1Q8NEY8 458 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 LILRB4Q8NHJ6 448 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 PCNPQ8WW12 178 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CCDC106Q9BWC9 280 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CACYBPQ9HB71 228 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ING3Q9NXR8 418 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 VTI1BQ9UEU0 232 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 AKT3Q9Y243 479 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SPO11Q9Y5K1 396 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ZNFX1Q9P2E3 1918 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 KLHL18O94889 574 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 UQCRC1P31930 480 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 RPL35P42766 123 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CRKP46108 304 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 YWHAZP63104 245 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 TNK2Q07912 1038 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CEACAM7Q14002 265 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SLC39A4Q6P5W5 647 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 BHLHB9Q6PI77 547 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 RFPL4BQ6ZWI9 263 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 FAM35AQ86V20 835 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SLC44A2Q8IWA5 706 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 TIGD4Q8IY51 512 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 FAM9CQ8IZT9 166 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 BSNDQ8WZ55 320 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 NKD2Q969F2 451 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 PDE9AO76083 593 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 JCHAINP01591 159 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 CCNCP24863 283 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 SULT1E1P49888 294 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 TPI1P60174 286 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 MS4A2Q01362 244 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 RHAGQ02094 409 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 ALFQ53S48 1182 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 AGAP9Q5VTM2 703 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 SLC43A3Q8NBI5 491 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 GBA3Q9H227 469 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 CD274Q9NZQ7 290 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 C3orf18Q9UK00 162 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 BAIAP2Q9UQB8 552 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.4
SYNRG-229ENST00000621136 SNX9Q9Y5X1 595 aa12.52□□□□□ -0.4
SYNRG-229ENST00000621136 SNAP29O95721 258 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 THRBP10828 461 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 HGFP14210 728 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 NPY2RP49146 381 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 KRT73Q86Y46 540 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 JOSD2Q8TAC2 188 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 SAV1Q9H4B6 383 aaPredicted RBP12.52□□□□□ -0.41
SYNRG-229ENST00000621136 SEMA4BQ9NPR2 832 aaPredicted RBP12.52□□□□□ -0.41
SYNRG-229ENST00000621136 G3V2T6 193 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 H0YJX3 145 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 M0QX08 132 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
SYNRG-229ENST00000621136 PSKH1P11801 424 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 IDO1P14902 403 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 ZNF460Q14592 562 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 ANKRD13BQ86YJ7 626 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
SYNRG-229ENST00000621136 ABHD11Q8NFV4 315 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 SLC35B2Q8TB61 432 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 BIRC8Q96P09 236 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 HBEGFQ99075 208 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 LGMNQ99538 433 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 DYRK4Q9NR20 520 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.41
SYNRG-229ENST00000621136 HSFX1Q9UBD0 423 aa12.52□□□□□ -0.41
SYNRG-229ENST00000621136 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 BNIP3LO60238 219 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 PSMB4P28070 264 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 MTHFRP42898 656 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 RPS27LQ71UM5 84 aaKnown RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 TTC30BQ8N4P2 665 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 TRUB1Q8WWH5 349 aaKnown RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 FAM120BQ96EK7 910 aaKnown RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 CENPNQ96H22 339 aaPredicted RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 ZNF347Q96SE7 839 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 MXRA8Q9BRK3 442 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 DHRS4Q9BTZ2 278 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 SLC7A5P2Q9GIP4 190 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 DUSP12Q9UNI6 340 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 A0A0J9YYE9 177 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 NEMP2A6NFY4 417 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 EFCAB9A8MZ26 197 aa12.51□□□□□ -0.41
SYNRG-229ENST00000621136 DENRO43583 198 aaKnown RBP12.51□□□□□ -0.41
SYNRG-229ENST00000621136 RFPL2O75678 378 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms