RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TMEM253P0C7T8 217 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 TGM2P21980 687 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 LHCGRP22888 699 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 VIPR1P32241 457 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 GARSP41250 739 aaKnown RBP17.21■□□□□ 0.35
HMGN3-203ENST00000620514 BLKP51451 505 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 MESDQ14696 234 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 CNGA3Q16281 694 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 DENND2CQ68D51 928 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 PQLC3Q8N755 202 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 OR1E3Q8WZA6 343 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 SPOCK2Q92563 424 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 DCBLD2Q96PD2 775 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 SMIM14Q96QK8 99 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 ABCG4Q9H172 646 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 FGF22Q9HCT0 170 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 ZNHIT6Q9NWK9 470 aaKnown RBP17.21■□□□□ 0.35
HMGN3-203ENST00000620514 NCKIPSDQ9NZQ3 722 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 LRP4O75096 1905 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 CELSR3Q9NYQ7 3312 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 A0A0U1RQS6 177 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 NPIPB15A6NHN6 443 aaPredicted RBP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 BRINP1O60477 761 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 MFAP3LO75121 409 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 CSO75390 466 aaKnown RBP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 HEXIM1O94992 359 aaKnown RBP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 PGLSO95336 258 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 CTSEP14091 401 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 CTPS1P17812 591 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 KIAA1024LP59773 190 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 GBE1Q04446 702 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 IHHQ14623 411 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 PDK2Q15119 407 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 ELOCQ15369 112 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 TSPAN33Q86UF1 283 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 LRRC49Q8IUZ0 686 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 FSTL5Q8N475 847 aaPredicted RBP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 SLC35G2Q8TBE7 412 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 RAPGEF5Q92565 580 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 MAML1Q92585 1016 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 FAF2Q96CS3 445 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 SEMA3CQ99985 751 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 LGR4Q9BXB1 951 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 MRPL40Q9NQ50 206 aaKnown RBP17.2■□□□□ 0.34
HMGN3-203ENST00000620514 SIRPGQ9P1W8 387 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 GULP1Q9UBP9 304 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 PHTF1Q9UMS5 762 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 DOLKQ9UPQ8 538 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 LAMA5O15230 3695 aa17.2■□□□□ 0.34
HMGN3-203ENST00000620514 COL27A1Q8IZC6 1860 aaPredicted RBP17.19■□□□□ 0.34
HMGN3-203ENST00000620514 A0A1W2PQ67 120 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 CACNB4O00305 520 aaPredicted RBP17.19■□□□□ 0.34
HMGN3-203ENST00000620514 MATN3O15232 486 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 TNFP01375 233 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 PDHA1P08559 390 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 KRT7P08729 469 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 TPM1P09493 284 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 MAN1A1P33908 653 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 TRIM23P36406 574 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 DSC2Q02487 901 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 ITKQ08881 620 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 SLC10A2Q12908 348 aaPredicted RBP17.19■□□□□ 0.34
HMGN3-203ENST00000620514 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
HMGN3-203ENST00000620514 RALGPS1Q5JS13 557 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 ZFYVE27Q5T4F4 411 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 ARMC12Q5T9G4 340 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 PNCKQ6P2M8 343 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 HSD11B1LQ7Z5J1 315 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 CBARPQ8N350 705 aaPredicted RBP17.19■□□□□ 0.34
HMGN3-203ENST00000620514 KYQ8NBH2 561 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 OR56A4Q8NGH8 313 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 ATL2Q8NHH9 583 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 PIH1D2Q8WWB5 315 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 GLMNQ92990 594 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 NUS1Q96E22 293 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 DEPDC7Q96QD5 511 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 RBM22Q9NW64 420 aaKnown RBP eCLIP17.19■□□□□ 0.34
HMGN3-203ENST00000620514 PADI4Q9UM07 663 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 RAI2Q9Y5P3 530 aa17.19■□□□□ 0.34
HMGN3-203ENST00000620514 RP1P56715 2156 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 A0A087WV48 116 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 MPOP05164 745 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 ALPIP09923 528 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 CYP2A6P11509 494 aaPredicted RBP17.18■□□□□ 0.34
HMGN3-203ENST00000620514 KDELR1P24390 212 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 ETV3P41162 512 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 RPIAP49247 311 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 IFI16Q16666 785 aaKnown RBP17.18■□□□□ 0.34
HMGN3-203ENST00000620514 FAM182AQ5T1J6 154 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 ESRP1Q6NXG1 681 aaKnown RBP17.18■□□□□ 0.34
HMGN3-203ENST00000620514 RFLNAQ6ZTI6 216 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 GKN2Q86XP6 184 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 MAP7D3Q8IWC1 876 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 SCRN2Q96FV2 425 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 CRELD1Q96HD1 420 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 CCDC42Q96M95 316 aa17.18■□□□□ 0.34
HMGN3-203ENST00000620514 TSGA13Q96PP4 275 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms