RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 TNFAIP8L3Q5GJ75 292 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 AARS2Q5JTZ9 985 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 NAPRTQ6XQN6 538 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 USP45Q70EL2 814 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 CHPFQ8IZ52 775 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 PSKH2Q96QS6 385 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ILKAPQ9H0C8 392 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 MTG2Q9H4K7 406 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 E9PBE3 544 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 MUSKO15146 869 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 KLHL41O60662 606 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 DGKGP49619 791 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ARSDP51689 593 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ACOX1Q15067 660 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ATAT1Q5SQI0 421 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 HIPK4Q8NE63 616 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 SHKBP1Q8TBC3 707 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 KLHL32Q96NJ5 620 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 POLR3BQ9NW08 1133 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 GYG2O15488 501 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 OAS1P00973 400 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ALDOAP04075 364 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 SERPINE1P05121 402 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ATXN8OSP0DMR3 200 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 PBX2P40425 430 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 GRM2Q14416 872 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 FBXL19Q6PCT2 694 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ACAD11Q709F0 780 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 LYSMD3Q7Z3D4 306 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 SUSD6Q92537 303 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 FEM1CQ96JP0 617 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 CLDND1Q9NY35 253 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 DNMT3BQ9UBC3 853 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 PCDH8O95206 1070 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 ADH1CP00326 375 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 PRSS56P0CW18 603 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 UGT1A6P19224 532 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 UGT1A1P22309 533 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 UGT1A4P22310 534 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 UGT1A3P35503 534 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 UGT1A5P35504 534 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 TCEA2Q15560 299 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 KIF19Q2TAC6 998 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 HECTD2Q5U5R9 776 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 MBLAC2Q68D91 279 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 DENND1AQ8TEH3 1009 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 ACDQ96AP0 544 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 ZNF689Q96CS4 500 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-213ENST00000620219 MOCS1Q9NZB8 636 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-213ENST00000620219 SRRM3A6NNA2 597 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-213ENST00000620219 DRGXA6NNA5 263 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 ANKRD66B4E2M5 251 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 CCDC153Q494R4 210 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 ALYREFQ86V81 257 aaKnown RBP15.75■□□□□ 0.11
CPSF1-213ENST00000620219 CDC26Q8NHZ8 85 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 IRF7Q92985 503 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 POMKQ9H5K3 350 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 RXFP1Q9HBX9 757 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 NEMP2A6NFY4 417 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 HNRNPLP14866 589 aaKnown RBP eCLIP15.75■□□□□ 0.11
CPSF1-213ENST00000620219 FSHRP23945 695 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 USP4Q13107 963 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 PFKFB4Q16877 469 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 STMN2Q93045 179 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 ULK4Q96C45 1275 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 CDKN2AIPNLQ96HQ2 116 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 EURLQ9NYK6 297 aa15.75■□□□□ 0.11
CPSF1-213ENST00000620219 CIB2O75838 187 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 CRHR1P34998 444 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 CDH13P55290 713 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 ECT2LQ008S8 904 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 AFTPHQ6ULP2 937 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 PLD6Q8N2A8 252 aaKnown RBP15.74■□□□□ 0.11
CPSF1-213ENST00000620219 WFDC5Q8TCV5 224 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 TRMT2BQ96GJ1 504 aaKnown RBP15.74■□□□□ 0.11
CPSF1-213ENST00000620219 ZNF599Q96NL3 588 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 KIFC1Q9BW19 673 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 KDM4CQ9H3R0 1056 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 GGA2Q9UJY4 613 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 STARD13Q9Y3M8 1113 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 AURKAO14965 403 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 FGF19O95750 216 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 BPGMP07738 259 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 ZNF7P17097 686 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-213ENST00000620219 MAGEA10P43363 369 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-213ENST00000620219 RGS4P49798 205 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 CLCN5P51795 746 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 HSPA14Q0VDF9 509 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 ZNF284Q2VY69 593 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 SGO1Q5FBB7 561 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 PITRM1Q5JRX3 1037 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 C1orf53Q5VUE5 145 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 KIAA0930Q6ICG6 404 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-213ENST00000620219 RANBP10Q6VN20 620 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 TMEM135Q86UB9 458 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 ITFG1Q8TB96 612 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 STYXQ8WUJ0 223 aa15.74■□□□□ 0.11
CPSF1-213ENST00000620219 THAP1Q9NVV9 213 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms