RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 STN1Q9H668 368 aaKnown RBP19.09■□□□□ 0.65
PSPC1-206ENST00000619300 TLR9Q9NR96 1032 aa19.09■□□□□ 0.65
PSPC1-206ENST00000619300 PLK2Q9NYY3 685 aa19.09■□□□□ 0.65
PSPC1-206ENST00000619300 KIAA1522Q9P206 1035 aaPredicted RBP19.09■□□□□ 0.65
PSPC1-206ENST00000619300 XPR1Q9UBH6 696 aa19.09■□□□□ 0.65
PSPC1-206ENST00000619300 CRYL1Q9Y2S2 319 aa19.09■□□□□ 0.65
PSPC1-206ENST00000619300 HSPA4LO95757 839 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 OGNP20774 298 aaKnown RBP19.08■□□□□ 0.65
PSPC1-206ENST00000619300 SLC8A1P32418 973 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 ELF3P78545 371 aaPredicted RBP19.08■□□□□ 0.65
PSPC1-206ENST00000619300 KRT72Q14CN4 511 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 FAM91A1Q658Y4 838 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 CYB5D1Q6P9G0 228 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 SHKBP1Q8TBC3 707 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 MICAL1Q8TDZ2 1067 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 PDCD6IPQ8WUM4 868 aaKnown RBP19.08■□□□□ 0.65
PSPC1-206ENST00000619300 INPP5DQ92835 1189 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 PRR11Q96HE9 360 aaPredicted RBP19.08■□□□□ 0.65
PSPC1-206ENST00000619300 RILPQ96NA2 401 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 SMIM14Q96QK8 99 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 FAM96AQ9H5X1 160 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 GPAMQ9HCL2 828 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 KLC4Q9NSK0 619 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 CORO1CQ9ULV4 474 aaPredicted RBP19.08■□□□□ 0.65
PSPC1-206ENST00000619300 CLEC4EQ9ULY5 219 aa19.08■□□□□ 0.65
PSPC1-206ENST00000619300 K7ERQ8 282 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 DLX3O60479 287 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 HNRNPCL1O60812 293 aaKnown RBP19.08■□□□□ 0.64
PSPC1-206ENST00000619300 CCDC22O60826 627 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 FGF19O95750 216 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 LPOP22079 712 aaPredicted RBP19.08■□□□□ 0.64
PSPC1-206ENST00000619300 PMLP29590 882 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 ABL2P42684 1182 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 EPHA5P54756 1037 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 CDKN2DP55273 166 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 CSHL1Q14406 222 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 SEMA3AQ14563 771 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 ATXN7L2Q5T6C5 722 aaPredicted RBP19.08■□□□□ 0.64
PSPC1-206ENST00000619300 GPR158Q5T848 1215 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 AGAP9Q5VTM2 703 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 FAM45BPQ6NSW5 357 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 TTC7BQ86TV6 843 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.08■□□□□ 0.64
PSPC1-206ENST00000619300 FAM45AQ8TCE6 357 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 SH3RF2Q8TEC5 729 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 SLC7A6OSQ96CW6 309 aaPredicted RBP19.08■□□□□ 0.64
PSPC1-206ENST00000619300 NSL1Q96IY1 281 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 UBXN10Q96LJ8 280 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 TMEM237Q96Q45 408 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 EBF4Q9BQW3 602 aa19.08■□□□□ 0.64
PSPC1-206ENST00000619300 LAMA2P24043 3122 aaKnown RBP19.08■□□□□ 0.64
PSPC1-206ENST00000619300 TRAFD1O14545 582 aaPredicted RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 RFPL2O75678 378 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 LTA4HP09960 611 aaKnown RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 CCDC166P0CW27 439 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 ALOX15P16050 662 aaPredicted RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 HOXB8P17481 243 aaPredicted RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 PTPN2P17706 415 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 GRIA4P48058 902 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 STC1P52823 247 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 LMAN2Q12907 356 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 CMTM8Q8IZV2 173 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 TCEAL4Q96EI5 215 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 UNKQ9C0B0 810 aaKnown RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 DRC3Q9H069 523 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 ARL8BQ9NVJ2 186 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 LNPEPQ9UIQ6 1025 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 ZNF195O14628 629 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 FZD6O60353 706 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 WISP3O95389 354 aaPredicted RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 CYBBP04839 570 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 DDX6P26196 483 aaKnown RBP eCLIP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 SLC26A3P40879 764 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 NAGLUP54802 743 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 AP1S1P61966 158 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 TYSND1Q2T9J0 566 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 ZNF549Q6P9A3 640 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 AFTPHQ6ULP2 937 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 PTCD3Q96EY7 689 aaKnown RBP19.07■□□□□ 0.64
PSPC1-206ENST00000619300 DNAJC28Q9NX36 388 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 RWDD3Q9Y3V2 267 aa19.07■□□□□ 0.64
PSPC1-206ENST00000619300 SMAD6O43541 496 aaKnown RBP19.06■□□□□ 0.64
PSPC1-206ENST00000619300 KRT16P08779 473 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 CD70P32970 193 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 UBE3AQ05086 875 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 ASPHQ12797 758 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 KLC3Q6P597 504 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 MAVSQ7Z434 540 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 ZNF781Q8N8C0 355 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 USP13Q92995 863 aaPredicted RBP19.06■□□□□ 0.64
PSPC1-206ENST00000619300 C17orf80Q9BSJ5 609 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 ILKAPQ9H0C8 392 aaPredicted RBP19.06■□□□□ 0.64
PSPC1-206ENST00000619300 MAN1C1Q9NR34 630 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 INTS10Q9NVR2 710 aaKnown RBP19.06■□□□□ 0.64
PSPC1-206ENST00000619300 HACD3Q9P035 362 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 CCL26Q9Y258 94 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 PCDHB9Q9Y5E1 797 aa19.06■□□□□ 0.64
PSPC1-206ENST00000619300 LINC01553A4QN01 128 aa19.05■□□□□ 0.64
PSPC1-206ENST00000619300 MGRN1O60291 552 aa19.05■□□□□ 0.64
PSPC1-206ENST00000619300 SERPINA6P08185 405 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms