RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 LOC285095A0A1B0GVY8 99 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 CCDC162PA2VCL2 907 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 NT5C1B-RDH14C9J2C7 533 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 FBP2O00757 339 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 SIX3O95343 332 aaPredicted RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 IMPDH1P20839 514 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 PBX3P40426 434 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 RALGDSQ12967 914 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 SERINC3Q13530 473 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 ARHGAP18Q8N392 663 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 TEX26Q8N6G2 289 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 GABPB2Q8TAK5 448 aaPredicted RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 CCDC126Q96EE4 140 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 C3orf30Q96M34 536 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 MEAF6Q9HAF1 191 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.23□□□□□ -0.61
TP53-223ENST00000618944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.23□□□□□ -0.61
TP53-223ENST00000618944 GIMAP2Q9UG22 337 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 VPS28Q9UK41 221 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 PCDHGA7Q9Y5G6 932 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 TRPM7Q96QT4 1865 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 ACOT8O14734 319 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 CD3EAPO15446 510 aaKnown RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 PAPSS2O95340 614 aaPredicted RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 GLP2RO95838 553 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 PAX3P23760 479 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 GATMP50440 423 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 IL10RBQ08334 325 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 TLR1Q15399 786 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 GEN1Q17RS7 908 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 UNC50Q53HI1 259 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 ZNF678Q5SXM1 525 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 RSPO2Q6UXX9 243 aaPredicted RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 APLFQ8IW19 511 aaPredicted RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 AFAP1L2Q8N4X5 818 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 ATP6V1E2Q96A05 226 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 FUBP3Q96I24 572 aaKnown RBP eCLIP11.23□□□□□ -0.61
TP53-223ENST00000618944 SMIM14Q96QK8 99 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
TP53-223ENST00000618944 PAPOLBQ9NRJ5 636 aaKnown RBP11.23□□□□□ -0.61
TP53-223ENST00000618944 IGLV3-10A0A075B6K4 115 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 DNAJA2O60884 412 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 BCAS2O75934 225 aaPredicted RBP11.22□□□□□ -0.61
TP53-223ENST00000618944 EOMESO95936 686 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 RPLP2P05387 115 aaKnown RBP11.22□□□□□ -0.61
TP53-223ENST00000618944 PMLP29590 882 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 SH3BP2P78314 561 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 XIAPP98170 497 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 TIAL1Q01085 375 aaKnown RBP eCLIP11.22□□□□□ -0.61
TP53-223ENST00000618944 DUSP4Q13115 394 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 STX5Q13190 355 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 GK3PQ14409 553 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 ZNF235Q14590 738 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 PFKFB4Q16877 469 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 PITRM1Q5JRX3 1037 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 REP15Q6BDI9 236 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 NADSYN1Q6IA69 706 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 SLC22A9Q8IVM8 553 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
TP53-223ENST00000618944 EXOC2Q96KP1 924 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 SEMA6AQ9H2E6 1030 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 IL1RL2Q9HB29 575 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 TLR8Q9NR97 1041 aaKnown RBP11.22□□□□□ -0.61
TP53-223ENST00000618944 FNIP2Q9P278 1114 aa11.22□□□□□ -0.61
TP53-223ENST00000618944 DRGXA6NNA5 263 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 C9JVG2 144 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 UBXN8O00124 270 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 PEX1O43933 1283 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 RNASEH2AO75792 299 aaKnown RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 GRIA2P42262 883 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 ACLYP53396 1101 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 LRP8Q14114 963 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 ADGRE1Q14246 886 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 OR4D1Q15615 310 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 SLC14A2Q15849 920 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 FAM26DQ5JW98 314 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 IL23RQ5VWK5 629 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 CYP2R1Q6VVX0 501 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 CYHR1Q6ZMK1 362 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 LGI2Q8N0V4 545 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 PTGR2Q8N8N7 351 aaPredicted RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 OR7D4Q8NG98 312 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 FAR2Q96K12 515 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 CNBD2Q96M20 576 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 NSUN5Q96P11 429 aaKnown RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 CYP2S1Q96SQ9 504 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 POLR1EQ9GZS1 481 aaKnown RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 CACNA2D2Q9NY47 1150 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 RIMS3Q9UJD0 308 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 FNDC3AQ9Y2H6 1198 aaKnown RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 COL4A4P53420 1690 aaPredicted RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 MYLKQ15746 1914 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 UBA6A0AVT1 1052 aaPredicted RBP11.21□□□□□ -0.61
TP53-223ENST00000618944 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
TP53-223ENST00000618944 TRIM38O00635 465 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms