RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 NAXDQ8IW45 347 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 UBL4BQ8N7F7 174 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 ACTL9Q8TC94 416 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 HTR3CQ8WXA8 447 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 TBATAQ96M53 351 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 FCRL5Q96RD9 977 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 WRAP53Q9BUR4 548 aaKnown RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 C1QTNF7Q9BXJ2 289 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 HEMGNQ9BXL5 484 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 USP29Q9HBJ7 922 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 PCDH9Q9HC56 1237 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 KCTD5Q9NXV2 234 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 PNMA8BQ9ULN7 279 aaPredicted RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 PACSIN2Q9UNF0 486 aaPredicted RBP8.28□□□□□ -1.08
NEK3-209ENST00000618856 WASF3Q9UPY6 502 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
NEK3-209ENST00000618856 CAPN8A6NHC0 703 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 ANKRD66B4E2M5 251 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 GIPC1O14908 333 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 SH3BP5O60239 455 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 ZNF189O75820 626 aaPredicted RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 RECQL5O94762 991 aaPredicted RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 SOD1P00441 154 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 EPOP01588 193 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 CSF2P04141 144 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 ADRB1P08588 477 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 XPAP23025 273 aaPredicted RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 NFKBIAP25963 317 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 CD86P42081 329 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 GRK6P43250 576 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 ARRB1P49407 418 aaPredicted RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 FAM193AP78312 1265 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 SEMG2Q02383 582 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 PTSQ03393 145 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 EIF2B5Q13144 721 aaKnown RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 MTM1Q13496 603 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
NEK3-209ENST00000618856 LRRC14Q15048 493 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 PTPRRQ15256 657 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 IRF4Q15306 451 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 LLGL1Q15334 1064 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 QPCTQ16769 361 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 UAP1L1Q3KQV9 507 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 PPM1JQ5JR12 505 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 CRTC1Q6UUV9 634 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 KDELC1Q6UW63 502 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 USP45Q70EL2 814 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 ZNF765Q7L2R6 523 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 HSD11B1LQ7Z5J1 315 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 ZNF567Q8N184 647 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 SLC25A45Q8N413 288 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 SLC35B2Q8TB61 432 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 DTD2Q96FN9 168 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 AGAP3Q96P47 875 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 GORASP1Q9BQQ3 440 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 CEP41Q9BYV8 373 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 CARD9Q9H257 536 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 KCNF1Q9H3M0 494 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 KLF15Q9UIH9 416 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 TRHDEQ9UKU6 1024 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 DNPEPQ9ULA0 475 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 GUCA1BQ9UMX6 200 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 PPP2R2CQ9Y2T4 447 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 COQ6Q9Y2Z9 468 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 CABIN1Q9Y6J0 2220 aa8.27□□□□□ -1.09
NEK3-209ENST00000618856 PCNX2A6NKB5 2137 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 TCRBV7S2A1N4TA0A589 114 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 RGSL1A5PLK6 1076 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 FAM221BA6H8Z2 402 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 C5orf60A6NFR6 353 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 PIAS2O75928 621 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 ALPIP09923 528 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 ATXN1LP0C7T5 689 aaKnown RBP8.26□□□□□ -1.09
NEK3-209ENST00000618856 ELFN1P0C7U0 828 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 RBP3P10745 1247 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 CYP2A6P11509 494 aaPredicted RBP8.26□□□□□ -1.09
NEK3-209ENST00000618856 ZNF30P17039 623 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 CA4P22748 312 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 RBL1P28749 1068 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 PMLP29590 882 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 CETN2P41208 172 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 STC1P52823 247 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 KIAA1024LP59773 190 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 CDK18Q07002 472 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 ITKQ08881 620 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 BNIP3Q12983 259 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 ZNF211Q13398 564 aaPredicted RBP8.26□□□□□ -1.09
NEK3-209ENST00000618856 INPP5AQ14642 412 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 SIX1Q15475 284 aaPredicted RBP8.26□□□□□ -1.09
NEK3-209ENST00000618856 PRAMEF14Q5SWL7 426 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 FAM182AQ5T1J6 154 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 N4BP2L1Q5TBK1 243 aaPredicted RBP8.26□□□□□ -1.09
NEK3-209ENST00000618856 PNCKQ6P2M8 343 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 KDM7AQ6ZMT4 941 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 MACC1Q6ZN28 852 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
NEK3-209ENST00000618856 TSPAN33Q86UF1 283 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms