RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 KATNAL2Q8IYT4 538 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 KRT35Q92764 455 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 CENPTQ96BT3 561 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 LACRTQ9GZZ8 138 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 CAAP1Q9H8G2 361 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 MBNL1Q9NR56 388 aaKnown RBP16.06■□□□□ 0.16
BRCA1-228ENST00000618469 DNAJC28Q9NX36 388 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 B4GALT6Q9UBX8 382 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.06■□□□□ 0.16
BRCA1-228ENST00000618469 RAI2Q9Y5P3 530 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 DUSP10Q9Y6W6 482 aa16.06■□□□□ 0.16
BRCA1-228ENST00000618469 SPTY2D1-AS1A0A0U1RR47 76 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 A8MX80 341 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 PGLSO95336 258 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 PCCBP05166 539 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 KRT10P13645 584 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 NFKBIAP25963 317 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 THOP1P52888 689 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 ZBTB17Q13105 803 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 TFDP2Q14188 446 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 FZD2Q14332 565 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 ALG1LQ6GMV1 187 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 KANSL1Q7Z3B3 1105 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 DCP2Q8IU60 420 aaKnown RBP16.05■□□□□ 0.16
BRCA1-228ENST00000618469 EID2Q8N6I1 236 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 SPOCK2Q92563 424 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
BRCA1-228ENST00000618469 CEP41Q9BYV8 373 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 SEPT10Q9P0V9 454 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 AMACRQ9UHK6 382 aa16.05■□□□□ 0.16
BRCA1-228ENST00000618469 BTNL10A8MVZ5 291 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 CST8O60676 142 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 PIAS2O75928 621 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 JCHAINP01591 159 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 PECAM1P16284 738 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-228ENST00000618469 VIPR1P32241 457 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 IFI35P80217 286 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-228ENST00000618469 TAZQ16635 292 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 WSCD2Q2TBF2 565 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 TFDP3Q5H9I0 405 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 LIPIQ6XZB0 460 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 USP45Q70EL2 814 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 HAUS1Q96CS2 278 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 CNDP2Q96KP4 475 aaKnown RBP16.04■□□□□ 0.16
BRCA1-228ENST00000618469 CALR3Q96L12 384 aaKnown RBP16.04■□□□□ 0.16
BRCA1-228ENST00000618469 TDRD1Q9BXT4 1180 aaKnown RBP16.04■□□□□ 0.16
BRCA1-228ENST00000618469 PHTF1Q9UMS5 762 aa16.04■□□□□ 0.16
BRCA1-228ENST00000618469 TDRD6O60522 2096 aaKnown RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 hCG_1818297A0A087WSY0 165 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 MACROD2A1Z1Q3 448 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 GRID2IPA4D2P6 1211 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CFAP69A5D8W1 941 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 NPIPB15A6NHN6 443 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 H3BM21 787 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 FFAR2O15552 330 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 PJA2O43164 708 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 TNFSF14O43557 240 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 RECQL5O94762 991 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 ZRANB2O95218 330 aaKnown RBP eCLIP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 PDHA1P08559 390 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CYP2A6P11509 494 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 NME1P15531 152 aaKnown RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CTPS1P17812 591 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 TGM2P21980 687 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CA4P22748 312 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 LHCGRP22888 699 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 DGKAP23743 735 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CTNNA1P35221 906 aaKnown RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 NIPAL4Q0D2K0 466 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CAMK2BQ13554 666 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 PTK2BQ14289 1009 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 ACOX1Q15067 660 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 CNGA3Q16281 694 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 FAM182AQ5T1J6 154 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 DENND2CQ68D51 928 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 DHRS13Q6UX07 377 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 MACC1Q6ZN28 852 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 B4GALNT4Q76KP1 1039 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 RCOR2Q8IZ40 523 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 TXLNBQ8N3L3 684 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 ARRDC2Q8TBH0 407 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 SLC39A7Q92504 469 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 IFT43Q96FT9 208 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 IL12RB2Q99665 862 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 UCKL1Q9NWZ5 548 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 SAE1Q9UBE0 346 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-228ENST00000618469 TRIM10Q9UDY6 481 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 LRP4O75096 1905 aa16.03■□□□□ 0.16
BRCA1-228ENST00000618469 A0A0U1RQJ8 604 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 ENC1O14682 589 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 FZD6O60353 706 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 HEXIM1O94992 359 aaKnown RBP16.02■□□□□ 0.16
BRCA1-228ENST00000618469 LDOC1O95751 146 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-228ENST00000618469 ALPIP09923 528 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 GM2AP17900 193 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 CES1P23141 567 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 CD86P42081 329 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms