RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TAF1AQ15573 450 aaPredicted RBP17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 TSNAXIP1Q2TAA8 658 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 LIPMQ5VYY2 423 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 MRNIPQ6NTE8 343 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 EFHBQ8N7U6 833 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 GPR150Q8NGU9 434 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 TTC8Q8TAM2 541 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 SH3RF2Q8TEC5 729 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 RILPQ96NA2 401 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 TM6SF2Q9BZW4 377 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 LRMDAQ9H2I8 198 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 CCL26Q9Y258 94 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 ZNF510Q9Y2H8 683 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 A0A0U1RQS6 177 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 TMEM114B3SHH9 223 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 DLX3O60479 287 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 H2AFYO75367 372 aaKnown RBP17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 ABL2P42684 1182 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 CLCN4P51793 760 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 MPPE1Q53F39 396 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 ZNF549Q6P9A3 640 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 PIM3Q86V86 326 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 ZNF781Q8N8C0 355 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 SHKBP1Q8TBC3 707 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 SPPL3Q8TCT6 385 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 SGF29Q96ES7 293 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 TSPAN17Q96FV3 270 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 ADGRE3Q9BY15 652 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 MRPL46Q9H2W6 279 aaKnown RBP17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 GPAMQ9HCL2 828 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 KLC4Q9NSK0 619 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 LZTS1Q9Y250 596 aa17.38■□□□□ 0.37
PCDHGC3-205ENST00000617641 ANKRD66B4E2M5 251 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 SMAD6O43541 496 aaKnown RBP17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 CCDC166P0CW27 439 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 CCR10P46092 362 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 GRIA4P48058 902 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 LMAN2Q12907 356 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 USP4Q13107 963 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 GPR158Q5T848 1215 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 OR6K2Q8NGY2 324 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 ANKRD49Q8WVL7 239 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 C17orf80Q9BSJ5 609 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 C2orf49Q9BVC5 232 aaPredicted RBP17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 TLR9Q9NR96 1032 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 STK38LQ9Y2H1 464 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 C2orf81A6NN90 581 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 CHRNGP07510 517 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 SYN1P17600 705 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 CD70P32970 193 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 NAGLUP54802 743 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 C7orf61Q8IZ16 206 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 RIN3Q8TB24 985 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 MICAL1Q8TDZ2 1067 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 PTCD3Q96EY7 689 aaKnown RBP17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 MRPL57Q9BQC6 102 aaKnown RBP17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 SIKE1Q9BRV8 207 aa17.37■□□□□ 0.37
PCDHGC3-205ENST00000617641 ZNF195O14628 629 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 LTA4HP09960 611 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 HNRNPH1P31943 449 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 STC1P52823 247 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 ALDH18A1P54886 795 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 FAM83EQ2M2I3 478 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 VWA5B1Q5TIE3 1220 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 TMEM207Q6UWW9 146 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 AGR3Q8TD06 166 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 MAN1C1Q9NR34 630 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 POLR3BQ9NW08 1133 aaPredicted RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 ARHGAP26Q9UNA1 814 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 PCDHB9Q9Y5E1 797 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 MTCL1Q9Y4B5 1905 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 HELZP42694 1942 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 OGNP20774 298 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 LPOP22079 712 aaPredicted RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 PMLP29590 882 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 IRS1P35568 1242 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 KPNA2P52292 529 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 TUBB3Q13509 450 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 TEAD2Q15562 447 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 TECRLQ5HYJ1 363 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 MPP7Q5T2T1 576 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 AGAP9Q5VTM2 703 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 FAM45BPQ6NSW5 357 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 RETSATQ6NUM9 610 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 AFTPHQ6ULP2 937 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 SDCCAG8Q86SQ7 713 aaPredicted RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 CMTM8Q8IZV2 173 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 TXNDC5Q8NBS9 432 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 FAM45AQ8TCE6 357 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 HERVK_113Q902F9 699 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 INPP5DQ92835 1189 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 UTP4Q969X6 686 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 NSL1Q96IY1 281 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 UBXN10Q96LJ8 280 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 CDH19Q9H159 772 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 BPIFA1Q9NP55 256 aa17.36■□□□□ 0.37
PCDHGC3-205ENST00000617641 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms