RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 IL36AQ9UHA7 158 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 ARIH1Q9Y4X5 557 aaPredicted RBP16.34■□□□□ 0.21
SNAP47-213ENST00000617596 TCRBV9S1A1TA0A576 114 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 SMIM23A6NLE4 172 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 CCL22O00626 93 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 TNFRSF4P43489 277 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 PFKPQ01813 784 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 RAD51Q06609 339 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 CBLBQ13191 982 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 PCID2Q5JVF3 399 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 GDPD4Q6W3E5 623 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 MDGA1Q8NFP4 955 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 FAM3CQ92520 227 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 ZNF669Q96BR6 464 aaPredicted RBP16.33■□□□□ 0.21
SNAP47-213ENST00000617596 TTC25Q96NG3 672 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 SLC2A4RGQ9NR83 387 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 POLR3BQ9NW08 1133 aaPredicted RBP16.33■□□□□ 0.21
SNAP47-213ENST00000617596 NDRG2Q9UN36 371 aaKnown RBP16.33■□□□□ 0.21
SNAP47-213ENST00000617596 SLC12A4Q9UP95 1085 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.33■□□□□ 0.21
SNAP47-213ENST00000617596 TCAF1Q9Y4C2 921 aa16.33■□□□□ 0.21
SNAP47-213ENST00000617596 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.21
SNAP47-213ENST00000617596 ANKRD36A6QL64 1941 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 EDDM13A0A1B0GTR0 161 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 GOLGA8TH3BQL2 631 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 AP3B1O00203 1094 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 F7P08709 466 aaPredicted RBP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 SLCO1A2P46721 670 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 LONRF1Q17RB8 773 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 ESRP1Q6NXG1 681 aaKnown RBP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 PKN3Q6P5Z2 889 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 PLPP6Q8IY26 295 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 PPHLN1Q8NEY8 458 aaKnown RBP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 ZNF483Q8TF39 744 aaPredicted RBP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 PPANQ9NQ55 473 aaKnown RBP16.33■□□□□ 0.2
SNAP47-213ENST00000617596 PRSS16Q9NQE7 514 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 SLC17A6Q9P2U8 582 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 SOX13Q9UN79 622 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 DUSP12Q9UNI6 340 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 C15orf41Q9Y2V0 281 aa16.33■□□□□ 0.2
SNAP47-213ENST00000617596 TCF20Q9UGU0 1960 aaKnown RBP16.32■□□□□ 0.2
SNAP47-213ENST00000617596 CCT8L1PA6NM43 557 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 GOLGA8CPA6NN73 597 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 PLK4O00444 970 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 SOCS5O75159 536 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 POLBP06746 335 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 HNRNPLP14866 589 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNAP47-213ENST00000617596 CA4P22748 312 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 TMPRSS15P98073 1019 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 ANKRD20A4Q4UJ75 823 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 TMEM135Q86UB9 458 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 ANKS4BQ8N8V4 417 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 KDM1BQ8NB78 822 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 EPS8L3Q8TE67 593 aaKnown RBP16.32■□□□□ 0.2
SNAP47-213ENST00000617596 FAM129BQ96TA1 746 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 KIFC1Q9BW19 673 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 SMYD2Q9NRG4 433 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNAP47-213ENST00000617596 RABGEF1Q9UJ41 708 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 MYLKQ15746 1914 aa16.32■□□□□ 0.2
SNAP47-213ENST00000617596 ZCWPW2A0A1B0GU75 182 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 KPNA3O00505 521 aaPredicted RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 LDB2O43679 373 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 NUDT17P0C025 328 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 DRD4P21917 467 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 ADRA1DP25100 572 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 HNF1BP35680 557 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 ZNF844Q08AG5 666 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 CNGA3Q16281 694 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 MMAAQ8IVH4 418 aaKnown RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 IL17RCQ8NAC3 791 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 TXNDC5Q8NBS9 432 aaKnown RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 CCDC197Q8NCU1 140 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 GSDMBQ8TAX9 411 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 ECHDC3Q96DC8 303 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 CORO1CQ9ULV4 474 aaPredicted RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 FAM237BA0A1B0GVD1 139 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 CXorf49A8MYA2 514 aaPredicted RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 POC1B-GALNT4F8VUJ3 575 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 KLF8O95600 359 aaPredicted RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 IL1BP01584 269 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 ERVK-10P10266 1014 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 DRD1P21728 446 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 ELAVL3Q14576 367 aaKnown RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 KBTBD12Q3ZCT8 623 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 STEAP4Q687X5 459 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 GLT6D1Q7Z4J2 308 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 PNPLA1Q8N8W4 532 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 OR13C4Q8NGS5 318 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 ZNF641Q96N77 438 aaPredicted RBP16.31■□□□□ 0.2
SNAP47-213ENST00000617596 BPIFA1Q9NP55 256 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 PPM1HQ9ULR3 514 aa16.31■□□□□ 0.2
SNAP47-213ENST00000617596 A0A0J9YYE9 177 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms