RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 SDHDO14521 159 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SCAMP3O14828 347 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 GPC4O75487 556 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 IPO13O94829 963 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 RHOQP17081 205 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 KCNQ1P51787 676 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SULT2A1Q06520 285 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 CEACAM7Q14002 265 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 TECRLQ5HYJ1 363 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 AFMIDQ63HM1 303 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 OR52E8Q6IFG1 317 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 CUZD1Q86UP6 607 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 PDSS2Q86YH6 399 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 COLGALT2Q8IYK4 626 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SLC39A13Q96H72 371 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 DNAJC1Q96KC8 554 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SMIM14Q96QK8 99 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 CYP2S1Q96SQ9 504 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SERPINI1Q99574 410 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SPON2Q9BUD6 331 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 ZBTB26Q9HCK0 441 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 RGS18Q9NS28 235 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 VWA8A3KMH1 1905 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 ARHGEF37A1IGU5 675 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 LRRC14BA6NHZ5 514 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 H3BNX3 289 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 MUSKO15146 869 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 MSLNQ13421 630 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 AGKQ53H12 422 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SLC24A5Q71RS6 500 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 BEND5Q7L4P6 421 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 KBTBD6Q86V97 674 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 SPATA24Q86W54 205 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 UMODL1-AS1Q8N2C9 162 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 CEP70Q8NHQ1 597 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 CALML6Q8TD86 181 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 LINC01599Q8WXQ3 324 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 JADE3Q92613 823 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 EFCAB1Q9HAE3 211 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
CACNA1C-231ENST00000616390 UBA6A0AVT1 1052 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 SLCO1B7G3V0H7 640 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PPP6CO00743 305 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 SLC2A3P11169 496 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 DUSP4Q13115 394 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 ZNF235Q14590 738 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 LBRQ14739 615 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 NFE2Q16621 373 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PIWIL4Q7Z3Z4 852 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 ABI1Q8IZP0 508 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 GABPB2Q8TAK5 448 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 C1orf74Q96LT6 269 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 STK39Q9UEW8 545 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PTGDR2Q9Y5Y4 395 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 C9JVG2 144 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 SIX3O95343 332 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 GOT2P00505 430 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 ALDH1A3P47895 512 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 LEPRP48357 1165 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 KPNA2P52292 529 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 NDST2P52849 883 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PRKAA2P54646 552 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PDAP1Q13442 181 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 MED21Q13503 144 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 KLHDC8BQ8IXV7 354 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 GALNT4Q8N4A0 578 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 SPPL2BQ8TCT7 592 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 GIMAP1Q8WWP7 306 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PPP2R3CQ969Q6 453 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 CLIP3Q96DZ5 547 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 BTN2A3PQ96KV6 586 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PCDHAC1Q9H158 963 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 MRM3Q9HC36 420 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 TMEM248Q9NWD8 314 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 PATJQ8NI35 1801 aa13.92□□□□□ -0.18
CACNA1C-231ENST00000616390 A0A0U1RQS6 177 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TRPC5OSA6NMA1 111 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 OAZ2O95190 189 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 S1PR4O95977 384 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 POLE2P56282 527 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 RALGDSQ12967 914 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 THEMIS2Q5TEJ8 643 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 RSPO2Q6UXX9 243 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 RNF19BQ6ZMZ0 732 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 UBE2Q1Q7Z7E8 422 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 LGI2Q8N0V4 545 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 OR7D4Q8NG98 312 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 CNDP1Q96KN2 507 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 LRGUKQ96M69 825 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 GBP5Q96PP8 586 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TSC22D3Q99576 134 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 IL1RL2Q9HB29 575 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNA1C-231ENST00000616390 TET1Q8NFU7 2136 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms