RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 HTRA2O43464 458 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 BANF1O75531 89 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 POP4O95707 220 aaKnown RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 HNRNPLP14866 589 aaKnown RBP eCLIP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 PGAM1P18669 254 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 MGAT1P26572 445 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 SERPINA4P29622 427 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 RECQLP46063 649 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 CCNHP51946 323 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 SESN2P58004 480 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 RAD51Q06609 339 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 ENPP2Q13822 863 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 MYLK3Q32MK0 819 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 FNDC3BQ53EP0 1204 aaKnown RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 SIRPB2Q5JXA9 342 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 CFAP58Q5T655 872 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 STEAP4Q687X5 459 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 DENND2CQ68D51 928 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 Q6ZVU0 165 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 MPP5Q8N3R9 675 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 OR2A12Q8NGT7 310 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 UBLCP1Q8WVY7 318 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 VOPP1Q96AW1 172 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 STAMBPL1Q96FJ0 436 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 LRIG1Q96JA1 1093 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 C9orf72Q96LT7 481 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 RANBP9Q96S59 729 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 APOL2Q9BQE5 337 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 SCNM1Q9BWG6 230 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 DUSP15Q9H1R2 295 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 TNKS2Q9H2K2 1166 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 TMEM245Q9H330 911 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 SYBUQ9NX95 663 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 EVLQ9UI08 416 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 CHMP2BQ9UQN3 213 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF106Q9H2Y7 1883 aaKnown RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 TNRC6BQ9UPQ9 1833 aaKnown RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 CELSR3Q9NYQ7 3312 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ADAMTS20P59510 1910 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 EDDM13A0A1B0GTR0 161 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 MAGEB16A2A368 324 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 TTC34A8MYJ7 566 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 TRAFD1O14545 582 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 FOXD2O60548 495 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 PGLSO95336 258 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ZIC2O95409 532 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 EGFP01133 1207 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 PRLP01236 227 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 PHBP35232 272 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 CHRNA4P43681 627 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 GRIA4P48058 902 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 GALK1P51570 392 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 CREB5Q02930 508 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 BCL2L1Q07817 233 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 MTM1Q13496 603 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 FRG1Q14331 258 aaKnown RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF234Q14588 700 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 KYNUQ16719 465 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 HNRNPA1L2Q32P51 320 aaKnown RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 TMEM196Q5HYL7 178 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 PCID2Q5JVF3 399 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ARMC12Q5T9G4 340 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 LRIG3Q6UXM1 1119 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 DPY19L3Q6ZPD9 716 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ANKMY2Q8IV38 441 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 IGDCC3Q8IVU1 814 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 SFTPA1Q8IWL2 248 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 IQCKQ8N0W5 287 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 EZH1Q92800 747 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF641Q96N77 438 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 HEPHQ9BQS7 1158 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 KIFC1Q9BW19 673 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 OSBPL1AQ9BXW6 950 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 LRRC4CQ9HCJ2 640 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 SAMD15Q9P1V8 674 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 ZC3H7BQ9UGR2 993 aaKnown RBP11.49□□□□□ -0.57
SLIRP-212ENST00000613856 HCN2Q9UL51 889 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 SOX13Q9UN79 622 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 LHX6Q9UPM6 363 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 PCDHGC4Q9Y5F7 938 aa11.49□□□□□ -0.57
SLIRP-212ENST00000613856 LAMA5O15230 3695 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 A0A087WUV0 522 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-212ENST00000613856 FAM237BA0A1B0GVD1 139 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 TSPAN11A1L157 253 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 RNF40O75150 1001 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 SASH3O75995 380 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 USP1O94782 785 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 PIGNO95427 931 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 ACSL3O95573 720 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 DRD1P21728 446 aa11.48□□□□□ -0.57
SLIRP-212ENST00000613856 ADRA1DP25100 572 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms