RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 PERM1Q5SV97 790 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 RBM44Q6ZP01 1051 aaKnown RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 PGBD5Q8N414 524 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 OR56A4Q8NGH8 313 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 PCDH19Q8TAB3 1148 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 CTNNBL1Q8WYA6 563 aaPredicted RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 FUBP1Q96AE4 644 aaKnown RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 ZNF578Q96N58 590 aaPredicted RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 CTTNBP2NLQ9P2B4 639 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 GULP1Q9UBP9 304 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 NENFQ9UMX5 172 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 PDE2AO00408 941 aaPredicted RBP17.4■□□□□ 0.38
PRKN-209ENST00000612485 TNFRSF10CO14798 259 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 CBFA2T2O43439 604 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 PROSCO94903 275 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 MPOP05164 745 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 CD48P09326 243 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 H2AFZP0C0S5 128 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 GM2AP17900 193 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 IL4RP24394 825 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 TRIM23P36406 574 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 LSSP48449 732 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 MAXP61244 160 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 MMRN1Q13201 1228 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 TRIM14Q14142 442 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 PNCKQ6P2M8 343 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 CRTC1Q6UUV9 634 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 H2AFVQ71UI9 128 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 MAP7D3Q8IWC1 876 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 KCTD6Q8NC69 237 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 NUS1Q96E22 293 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 PDXPQ96GD0 296 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 COQ10AQ96MF6 247 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 RBM15Q96T37 977 aaKnown RBP eCLIP17.4■□□□□ 0.38
PRKN-209ENST00000612485 CCDC3Q9BQI4 270 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 WDR26Q9H7D7 661 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 POLR1BQ9H9Y6 1135 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 SIRPGQ9P1W8 387 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 GPR34Q9UPC5 381 aa17.4■□□□□ 0.38
PRKN-209ENST00000612485 TMEM202A6NGA9 273 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 DXOO77932 396 aaKnown RBP17.39■□□□□ 0.37
PRKN-209ENST00000612485 HEXIM1O94992 359 aaKnown RBP17.39■□□□□ 0.37
PRKN-209ENST00000612485 KRT10P13645 584 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 GJC1P36383 396 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 ARSEP51690 589 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 TRAF2Q12933 501 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 DPYSL3Q14195 570 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 PAFAH1B3Q15102 231 aaKnown RBP17.39■□□□□ 0.37
PRKN-209ENST00000612485 PDK2Q15119 407 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 TCEA2Q15560 299 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 CNGA3Q16281 694 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 SLC18A3Q16572 532 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 ARMC12Q5T9G4 340 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 SPECC1LQ69YQ0 1117 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 TIGD7Q6NT04 549 aaPredicted RBP17.39■□□□□ 0.37
PRKN-209ENST00000612485 NDUFAF2Q8N183 169 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 TEX26Q8N6G2 289 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 KYQ8NBH2 561 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 OR6C4Q8NGE1 309 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 OR8K1Q8NGG5 319 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 OR1E3Q8WZA6 343 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 ZNF670Q9BS34 389 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 DEF6Q9H4E7 631 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 NT5MQ9NPB1 228 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 HAUS2Q9NVX0 235 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 ZNHIT6Q9NWK9 470 aaKnown RBP17.39■□□□□ 0.37
PRKN-209ENST00000612485 ASXL3Q9C0F0 2248 aa17.39■□□□□ 0.37
PRKN-209ENST00000612485 PSMD11O00231 422 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 MFSD11O43934 449 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 PGLSO95336 258 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 KRT7P08729 469 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 TPM1P09493 284 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 ITPKBP27987 946 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 GARSP41250 739 aaKnown RBP17.38■□□□□ 0.37
PRKN-209ENST00000612485 PCBP4P57723 403 aaKnown RBP17.38■□□□□ 0.37
PRKN-209ENST00000612485 ERVPABLB-1P60509 514 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 ITKQ08881 620 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 GALNT2Q10471 571 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 ARHGEF7Q14155 803 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 SPIDRQ14159 915 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
PRKN-209ENST00000612485 ANKRD20A8PQ5CZ79 823 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 DENND2CQ68D51 928 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 NCBP2-AS2Q69YL0 99 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 USP45Q70EL2 814 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 ZNF248Q8NDW4 579 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 SCRN2Q96FV2 425 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 POLR1EQ9GZS1 481 aaKnown RBP17.38■□□□□ 0.37
PRKN-209ENST00000612485 SYNDIG1Q9H7V2 258 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 FGF22Q9HCT0 170 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 PHPT1Q9NRX4 125 aaPredicted RBP17.38■□□□□ 0.37
PRKN-209ENST00000612485 ENTPD2Q9Y5L3 495 aa17.38■□□□□ 0.37
PRKN-209ENST00000612485 SSU72P8A0A1W2PR75 194 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 MYCLP1P12525 358 aaPredicted RBP17.37■□□□□ 0.37
PRKN-209ENST00000612485 HOXB3P14651 431 aaPredicted RBP17.37■□□□□ 0.37
PRKN-209ENST00000612485 CES1P23141 567 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 MAN1A1P33908 653 aa17.37■□□□□ 0.37
PRKN-209ENST00000612485 IFI16Q16666 785 aaKnown RBP17.37■□□□□ 0.37
PRKN-209ENST00000612485 ATP13A4Q4VNC1 1196 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms