RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 GOLGA8KD6RF30 607 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 GOLGA8TH3BQL2 631 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 RNASEH1O60930 286 aaKnown RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 PAPSS2O95340 614 aaPredicted RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 CHRM1P11229 460 aaPredicted RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 MRPS21P82921 87 aaKnown RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 CAMK2GQ13555 558 aaPredicted RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 CCINQ13939 588 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 SKIDA1Q1XH10 827 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 FBXO43Q4G163 708 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 PARS2Q7L3T8 475 aaKnown RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 KCNMB4Q86W47 210 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 RASSF3Q86WH2 238 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 PPM1NQ8N819 430 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 OR13C4Q8NGS5 318 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 OR13J1Q8NGT2 312 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 RPLP0P6Q8NHW5 317 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 SPOCK2Q92563 424 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 PPP1R16AQ96I34 528 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 SRPK1Q96SB4 655 aaKnown RBP17.59■□□□□ 0.41
SREK1-216ENST00000612404 TRABDQ9H4I3 376 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 DYRK4Q9NR20 520 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 ZFATQ9P243 1243 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 DKK3Q9UBP4 350 aa17.59■□□□□ 0.41
SREK1-216ENST00000612404 TSPAN11A1L157 253 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 C19orf67A6NJJ6 358 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 CXorf49A8MYA2 514 aaPredicted RBP17.58■□□□□ 0.4
SREK1-216ENST00000612404 UPK3BL1B0FP48 263 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 UPK3BL2E5RIL1 263 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 C1QTNF3-AMACRE9PGA6 284 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 MYZAPP0CAP1 466 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 HOXB2P14652 356 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 TIMP2P16035 220 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 LPOP22079 712 aaPredicted RBP17.58■□□□□ 0.4
SREK1-216ENST00000612404 PDE1BQ01064 536 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 MGAT5Q09328 741 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 HSP90AA5PQ58FG0 334 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 CYS1Q717R9 158 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 OR4K2Q8NGD2 314 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 HCAR2Q8TDS4 363 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 STYXQ8WUJ0 223 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 CDKL2Q92772 493 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 GABRG3Q99928 467 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 ROPN1BQ9BZX4 212 aaPredicted RBP17.58■□□□□ 0.4
SREK1-216ENST00000612404 ROPN1Q9HAT0 212 aaPredicted RBP17.58■□□□□ 0.4
SREK1-216ENST00000612404 ZFYVE1Q9HBF4 777 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 BPIFA1Q9NP55 256 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 SMYD2Q9NRG4 433 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 POLR3BQ9NW08 1133 aaPredicted RBP17.58■□□□□ 0.4
SREK1-216ENST00000612404 VPS18Q9P253 973 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 PPIL1Q9Y3C6 166 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 IKBKGQ9Y6K9 419 aa17.58■□□□□ 0.4
SREK1-216ENST00000612404 CKAP5Q14008 2032 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 FAM159BA6NKW6 160 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 STX7O15400 261 aaKnown RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 OPA1O60313 960 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 ADAM23O75077 832 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 CLDN7O95471 211 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 ITGB7P26010 798 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 MSH2P43246 934 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 ZNF140P52738 457 aaPredicted RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 PRAMEP78395 509 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 PRKCQQ04759 706 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 PDPK2PQ6A1A2 396 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 KIAA0930Q6ICG6 404 aaPredicted RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 KIAA1211LQ6NV74 962 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 TSPAN33Q86UF1 283 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 LRRC6Q86X45 466 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 TTC30BQ8N4P2 665 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 OR6P1Q8NGX9 317 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 HDAC10Q969S8 669 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 MCCC1Q96RQ3 725 aaPredicted RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 PAFAH2Q99487 392 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 PCDH12Q9NPG4 1184 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 SLC17A6Q9P2U8 582 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 B4GALT6Q9UBX8 382 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 TCEA3O75764 348 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 C1QAP02745 245 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 NFKBIAP25963 317 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 ARSDP51689 593 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 GPS2Q13227 327 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 FRG1Q14331 258 aaKnown RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 FAM46CQ5VWP2 391 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 FBXL19Q6PCT2 694 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 CRTC1Q6UUV9 634 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 ARRDC3Q96B67 414 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 TBATAQ96M53 351 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 TMEM109Q9BVC6 243 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 SUDS3Q9H7L9 328 aaPredicted RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 IARS2Q9NSE4 1012 aaKnown RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 NLE1Q9NVX2 485 aaPredicted RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 BCCIPQ9P287 314 aaKnown RBP eCLIP17.57■□□□□ 0.4
SREK1-216ENST00000612404 TBK1Q9UHD2 729 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 FNDC3AQ9Y2H6 1198 aaKnown RBP17.57■□□□□ 0.4
SREK1-216ENST00000612404 PKP3Q9Y446 797 aa17.57■□□□□ 0.4
SREK1-216ENST00000612404 PLK4O00444 970 aa17.56■□□□□ 0.4
SREK1-216ENST00000612404 RPP40O75818 363 aaKnown RBP17.56■□□□□ 0.4
SREK1-216ENST00000612404 ARNTP27540 789 aa17.56■□□□□ 0.4
SREK1-216ENST00000612404 ARCN1P48444 511 aaKnown RBP17.56■□□□□ 0.4
SREK1-216ENST00000612404 SATB1Q01826 763 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms