RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 PITRM1Q5JRX3 1037 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 IFIT1BQ5T764 474 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 SLC25A24Q6NUK1 477 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 DPY19L2P1Q6NXN4 242 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 FUT10Q6P4F1 479 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 IL27RAQ6UWB1 636 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 LAYNQ6UX15 382 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 RTL4Q6ZR62 310 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 TOM1L2Q6ZVM7 507 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 SETD3Q86TU7 594 aaPredicted RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 TAC4Q86UU9 113 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 CEP97Q8IW35 865 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 SLC43A2Q8N370 569 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 MYCT1Q8N699 235 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 C19orf47Q8N9M1 422 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 TTC29Q8NA56 475 aaPredicted RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 ADAMTS17Q8TE56 1095 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 CHPT1Q8WUD6 406 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 PYDC1Q8WXC3 89 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 BORCS5Q969J3 196 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 RFT1Q96AA3 541 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 ARHGEF26Q96DR7 871 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 RCC1LQ96I51 464 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 FAR2Q96K12 515 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 TRNT1Q96Q11 434 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 XPO6Q96QU8 1125 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 KCNS3Q9BQ31 491 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 C1QTNF7Q9BXJ2 289 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 C1QTNF3Q9BXJ4 246 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 FRMD8Q9BZ67 464 aaPredicted RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 ARHGAP39Q9C0H5 1083 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 IKZF4Q9H2S9 585 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 TASP1Q9H6P5 420 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 PHAXQ9H814 394 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 ERVMER34-1Q9H9K5 563 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 C17orf75Q9HAS0 396 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 RAVER2Q9HCJ3 691 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 IL26Q9NPH9 171 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 UFSP2Q9NUQ7 469 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 CMTM6Q9NX76 183 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 SMPD4Q9NXE4 827 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 DDX43Q9NXZ2 648 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 AKAP7Q9P0M2 348 aaPredicted RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 PSMC3IPQ9P2W1 217 aaPredicted RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 GRHPRQ9UBQ7 328 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 TRMT6Q9UJA5 497 aaKnown RBP5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 B3GNT3Q9Y2A9 372 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 SLC12A7Q9Y666 1083 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 CYP46A1Q9Y6A2 500 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 FPGT-TNNI3KV9GXZ4 949 aa5.87□□□□□ -1.47
LSM1P2-201ENST00000604911 KIF21AQ7Z4S6 1674 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 RB1CC1Q8TDY2 1594 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 HMX3A6NHT5 357 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 OR6C70A6NIJ9 312 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 USP27XA6NNY8 438 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 C1QTNF3-AMACRE9PGA6 284 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 TXNDC9O14530 226 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 NUDT21O43809 227 aaKnown RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 CCDC22O60826 627 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 CABYRO75952 493 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 IPO13O94829 963 aaKnown RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 DDNO94850 711 aaPredicted RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 HEXIM1O94992 359 aaKnown RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 APOL3O95236 402 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 RAB3DO95716 219 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 FTCDO95954 541 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 EPHX1P07099 455 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 C8BP07358 591 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 ADRB2P07550 413 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 KRT19P08727 400 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 GNAI3P08754 354 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 CCDC130P13994 396 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 ITGALP20701 1170 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 CXCR2P25025 360 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 SERPINB1P30740 379 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 IL6STP40189 918 aaPredicted RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 EIF2S3P41091 472 aaKnown RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 RECQLP46063 649 aaPredicted RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 PRRX1P54821 245 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 STARD6P59095 220 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 UBE2HP62256 183 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 GUCY1A3Q02108 690 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 UBE3AQ05086 875 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 TARDBPQ13148 414 aaKnown RBP eCLIP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 KCNC3Q14003 757 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 STARD3Q14849 445 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 CAMK4Q16566 473 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 DUSP7Q16829 419 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 DPY19L1Q2PZI1 675 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 C2orf27AQ580R0 203 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 MARCH8Q5T0T0 291 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 ARHGEF16Q5VV41 709 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 RNF219Q5W0B1 726 aaPredicted RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 HEATR6Q6AI08 1181 aaKnown RBP5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 SLFN12LQ6IEE8 588 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
LSM1P2-201ENST00000604911 PYHIN1Q6K0P9 492 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms