RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CCNB1P14635 433 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TCN2P20062 427 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MAP4P27816 1152 aaKnown RBP11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 COPB1P53618 953 aaKnown RBP11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MC1RQ01726 317 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ILF3Q12906 894 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 AGERQ15109 404 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CFAP58Q5T655 872 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MANEALQ5VSG8 457 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZNF787Q6DD87 383 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ASB18Q6ZVZ8 466 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KDELC2Q7Z4H8 507 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NRROSQ86YC3 692 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PATE1Q8WXA2 126 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SHC3Q92529 594 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SMARCE1Q969G3 411 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RTP4Q96DX8 246 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 LGR4Q9BXB1 951 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CARS2Q9HA77 564 aaKnown RBP11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TMEM248Q9NWD8 314 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TAAR2Q9P1P5 351 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 OR12D3Q9UGF7 316 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NEU3Q9UQ49 428 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ATP8A1Q9Y2Q0 1164 aa11.81□□□□□ -0.52
PDLIM1P1-201ENST00000604187 IGHV1OR21-1A0A087WYE8 117 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FAM72CH0Y354 149 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GOLGA8SH3BPF8 625 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MKRN2OSH3BPM6 223 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SEMA7AO75326 666 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SCNN1AP37088 669 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 STAT1P42224 750 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GPR3P46089 330 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ATP11AP98196 1134 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PTK2Q05397 1052 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RAB6CQ53S08 254 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 C2CD6Q53TS8 623 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FAM72AQ5TYM5 149 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ISM2Q6H9L7 571 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FAM72DQ6L9T8 149 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TCTN3Q6NUS6 607 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SLC30A9Q6PML9 568 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BNIPLQ7Z465 357 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SLC47A2Q86VL8 602 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FAM72BQ86X60 149 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ZSWIM9Q86XI8 627 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 XYLT1Q86Y38 959 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BMPERQ8N8U9 685 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GALNT11Q8NCW6 608 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NELFBQ8WX92 580 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CASKIN2Q8WXE0 1202 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TEFMQ96QE5 360 aaKnown RBP11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GSDMCQ9BYG8 508 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RAB6CQ9H0N0 254 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 LHX3Q9UBR4 397 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 APEX2Q9UBZ4 518 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KCTD3Q9Y597 815 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 KCNMB2Q9Y691 235 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 OTOGQ6ZRI0 2925 aa11.8□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TTLL8A6PVC2 850 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TEX33O43247 280 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 STK17BO94768 372 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 LRIG2O94898 1065 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GNA14O95837 355 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 HOXC4P09017 264 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SLC9A1P19634 815 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 AK4P27144 223 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ADRA1BP35368 520 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PPM1FP49593 454 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MARSP56192 900 aaKnown RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NRG1Q02297 640 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ABHD18Q0P651 414 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 INO80DQ53TQ3 878 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BRAT1Q6PJG6 821 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 FMR1NBQ8N0W7 255 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PELI3Q8N2H9 469 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TMEM35BQ8NCS4 154 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 HCAR2Q8TDS4 363 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SNX21Q969T3 373 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TBC1D31Q96DN5 1066 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SPRY4Q9C004 299 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SUV39H2Q9H5I1 410 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CTNND2Q9UQB3 1225 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MRPS18BQ9Y676 258 aaKnown RBP11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 POLQO75417 2590 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SDK2Q58EX2 2172 aa11.79□□□□□ -0.52
PDLIM1P1-201ENST00000604187 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SCN8AQ9UQD0 1980 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 A8MU76 341 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms