RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GABRB2P47870 512 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CLCNKBP51801 687 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF135P52742 658 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 P2RX3P56373 397 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 VBP1P61758 197 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 LMAN2Q12907 356 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 IL10RAQ13651 578 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 AANATQ16613 207 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CT83Q5H943 113 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 WASHC2DQ5SRD0 308 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CDCP2Q5VXM1 449 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SLFN13Q68D06 897 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SULT1C3Q6IMI6 304 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SCYL2Q6P3W7 929 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 KLHL24Q6TFL4 600 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 C1orf229Q6ZS94 237 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ADCK1Q86TW2 530 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SIX6OS1Q8N1H7 587 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MREGQ8N565 214 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 KDM1BQ8NB78 822 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 GPR156Q8NFN8 814 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 WNT8BQ93098 351 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 REXO5Q96IC2 774 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CEP170P1Q96L14 293 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CNTNAP3BQ96NU0 1288 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ZIM3Q96PE6 472 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 USP28Q96RU2 1077 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 DBNDD2Q9BQY9 259 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CNTNAP3Q9BZ76 1288 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 RAD21L1Q9H4I0 556 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 DENND2DQ9H6A0 471 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 TASP1Q9H6P5 420 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ECT2Q9H8V3 914 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 LIN7BQ9HAP6 207 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SAYSD1Q9NPB0 183 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 UVRAGQ9P2Y5 699 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 REV1Q9UBZ9 1251 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC7A8Q9UHI5 535 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CEMIPQ8WUJ3 1361 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 GOLGA8QA0A0J9YX86 632 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 A0A1B0GWJ7 208 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 GOLGA8OA6NCC3 632 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 NEURL1BA8MQ27 555 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 A8MUI8 341 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 GOLGA8NF8WBI6 632 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SNAP23O00161 211 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC22A1O15245 554 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CD3EAPO15446 510 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 AKR7A2O43488 359 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 NDUFA2O43678 99 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CLN5O75503 358 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SPDEFO95238 335 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PDE8BO95263 885 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PIGNO95427 931 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CSTAP01040 98 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ALPPP05187 535 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 LPLP06858 475 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SNRPAP09012 282 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ALPPL2P10696 532 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 FDPSP14324 419 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 NME1P15531 152 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ITGB8P26012 769 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CCR10P46092 362 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC11A1P49279 550 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 STARP49675 285 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CYP27A1Q02318 531 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MADCAM1Q13477 382 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CAPSQ13938 189 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 NPTX1Q15818 432 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CCDC58Q4VC31 144 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 TMEM177Q53S58 311 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNT1Q5JUK3 1230 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 LCN1P1Q5VSP4 162 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 RESP18Q5W5W9 173 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CNKSR3Q6P9H4 555 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 RANBP10Q6VN20 620 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 KCTD20Q7Z5Y7 419 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PIGWQ7Z7B1 504 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 AKAP14Q86UN6 197 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ZC3H18Q86VM9 953 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MON1AQ86VX9 555 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 NME9Q86XW9 330 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ERO1BQ86YB8 467 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 TICAM1Q8IUC6 712 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 OFCC1Q8IZS5 231 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 BRI3BPQ8WY22 251 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 DPF2Q92785 391 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 LRRC39Q96DD0 335 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SGF29Q96ES7 293 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 APOPT1Q96IL0 206 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 TSNARE1Q96NA8 513 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 OR1F2PQ96R84 312 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MNTQ99583 582 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ACE2Q9BYF1 805 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ANO3Q9BYT9 981 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 BTBD1Q9H0C5 482 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ASCC2Q9H1I8 757 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PABPC3Q9H361 631 aaKnown RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 SP140LQ9H930 580 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms