RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TCRBV9S1A1TA0A576 114 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ARHGEF33A8MVX0 844 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 PDHA2P29803 388 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TCEA2Q15560 299 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 C6orf52Q5T4I8 152 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 CPTPQ5TA50 214 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ARL10Q8N8L6 244 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 EPS8L1Q8TE68 723 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 B3GALT6Q96L58 329 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FRMD6Q96NE9 622 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TRIM2Q9C040 744 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TIPRLO75663 272 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 THRBP10828 461 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 GALNT18Q6P9A2 607 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 CHCHD6Q9BRQ6 235 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 MUC13Q9H3R2 512 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FAM240BA0A1B0GVZ2 78 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SLC28A1O00337 649 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 NRP2O60462 931 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 IFNA16P05015 189 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ENPEPQ07075 957 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 WDR59Q6PJI9 974 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TMPRSS11AQ6ZMR5 421 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF410Q86VK4 478 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 PQLC1Q8N2U9 271 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 OR52K2Q8NGK3 314 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 NPAS2Q99743 824 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TPK1Q9H3S4 243 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 UXTQ9UBK9 157 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 EGFL7Q9UHF1 273 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 MAGEL2Q9UJ55 1249 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TBC1D24Q9ULP9 559 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FER1L4A9Z1Z3 1794 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 RPTORQ8N122 1335 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TMEM150BA6NC51 233 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 NR2F6P10588 404 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CDH8P55286 799 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 GALNT5Q7Z7M9 940 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CCDC28BQ9BUN5 200 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CLEC4AQ9UMR7 237 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 BTNL10A8MVZ5 291 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 MARCKSL1P49006 195 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CDK9P50750 372 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SPATA6LQ8N4H0 392 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 EBNA1BP2Q99848 306 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CDK5RAP2Q96SN8 1893 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RARRES1P49788 294 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 THOP1P52888 689 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 HUNKP57058 714 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 FSCN1Q16658 493 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 REPS2Q8NFH8 660 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 OR2L5Q8NG80 312 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 OR2T34Q8NGX1 318 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 OR2T3Q8NH03 318 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 MECRQ9BV79 373 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SLCO1B3Q9NPD5 702 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RAB26Q9ULW5 256 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 BAIAP2Q9UQB8 552 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 PIAS1O75925 651 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CCNE2O96020 404 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CTSKP43235 329 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 TXNDC11Q6PKC3 985 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SMIM5Q71RC9 77 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 TMEM86AQ8N2M4 240 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF354BQ96LW1 612 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 TEFMQ96QE5 360 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SNX15Q9NRS6 342 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 DPP7Q9UHL4 492 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF638Q14966 1978 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 GTPBP1O00178 669 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 XYLBO75191 536 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 IFNA6P05013 189 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 PPIBP23284 216 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CLK3P49761 638 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CBX3Q13185 183 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 LY6KQ17RY6 165 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CXorf57Q6NSI4 855 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CNSTQ6PJW8 725 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SLC30A10Q6XR72 485 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 FAM98AQ8NCA5 519 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RASSF1Q9NS23 344 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 PSMD13Q9UNM6 376 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 BBIP1A8MTZ0 92 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ACKR2O00590 384 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 NKRFO15226 690 aaKnown RBP eCLIP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RGS10O43665 173 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CYP4X1Q8N118 509 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SLC9A6Q92581 669 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 DIRAS2Q96HU8 199 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 TRMUO75648 421 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 AP3S2P59780 193 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SCIMPQ6UWF3 145 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ZPBP2Q6X784 338 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms