RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MAXP61244 160 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 SKOR1P84550 965 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 DMWDQ09019 674 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 ELP6Q0PNE2 266 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 TCF15Q12870 199 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 ZBTB17Q13105 803 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 SIM2Q14190 667 aaPredicted RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 PRPSAP1Q14558 356 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 MAP7D1Q3KQU3 841 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 POM121L1PQ3SYA9 428 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 TNFAIP8L3Q5GJ75 292 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 ALG1LQ6GMV1 187 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 ERAP2Q6P179 960 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 NCEH1Q6PIU2 408 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 KDM7AQ6ZMT4 941 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 PRR23BQ6ZRT6 265 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 LPCAT2Q7L5N7 544 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 PID1Q7Z2X4 250 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 FAM124AQ86V42 546 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 CAND1Q86VP6 1230 aaKnown RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 TDRPQ86YL5 185 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 ARFGAP2Q8N6H7 521 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 FBXO36Q8NEA4 188 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 EPS8L3Q8TE67 593 aaKnown RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 RLN3Q8WXF3 142 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 FOXJ1Q92949 421 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 TEKT5Q96M29 485 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 KLHL32Q96NJ5 620 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 WDR83Q9BRX9 315 aaKnown RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 SLC25A51Q9H1U9 297 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 CENPHQ9H3R5 247 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 LRRC4CQ9HCJ2 640 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 PSD3Q9NYI0 1048 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 FETUBQ9UGM5 382 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 RSPH14Q9UHP6 348 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 LGALS13Q9UHV8 139 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 ADAM21Q9UKJ8 722 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 SARDHQ9UL12 918 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.14□□□□□ -0.79
UPF1-213ENST00000601981 TEX264Q9Y6I9 313 aa10.14□□□□□ -0.79
UPF1-213ENST00000601981 C16orf96A6NNT2 1141 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ERI2A8K979 691 aaKnown RBP10.13□□□□□ -0.79
UPF1-213ENST00000601981 NEMP1O14524 444 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 MUSKO15146 869 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 LILRB5O75023 590 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 CDH16O75309 829 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 BANF1O75531 89 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ANXA9O76027 345 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 PIGNO95427 931 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 SEMA4FO95754 770 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 GSTA2P09210 222 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ADRB3P13945 408 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 PSMB4P28070 264 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ATP5DP30049 168 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 GKP32189 559 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 DRD3P35462 400 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 DPP6P42658 865 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 RGRP47804 291 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 LMAN1P49257 510 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 EPHB1P54762 984 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 RPL6Q02878 288 aaKnown RBP10.13□□□□□ -0.79
UPF1-213ENST00000601981 CNTN1Q12860 1018 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 RASA2Q15283 850 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 SLC14A2Q15849 920 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ARMC12Q5T9G4 340 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 KCTD16Q68DU8 428 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ZNF534Q76KX8 674 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 TTC7BQ86TV6 843 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 ANKMY2Q8IV38 441 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 KLHDC8BQ8IXV7 354 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 PGBD5Q8N414 524 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 AADATQ8N5Z0 425 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 OR2T34Q8NGX1 318 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 OR14C36Q8NHC7 312 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 PDCD6IPQ8WUM4 868 aaKnown RBP10.13□□□□□ -0.79
UPF1-213ENST00000601981 ARRDC3Q96B67 414 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 TOE1Q96GM8 510 aaKnown RBP10.13□□□□□ -0.79
UPF1-213ENST00000601981 ADGRE3Q9BY15 652 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 CEP41Q9BYV8 373 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 VPS37BQ9H9H4 285 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 NOD2Q9HC29 1040 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 GLOD4Q9HC38 313 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 PREBQ9HCU5 417 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 VPS45Q9NRW7 570 aa10.13□□□□□ -0.79
UPF1-213ENST00000601981 WSB2Q9NYS7 404 aaPredicted RBP10.13□□□□□ -0.79
UPF1-213ENST00000601981 PI4KAP42356 2102 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TBC1D3DA0A087WVF3 549 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TBC1D3IA0A087WXS9 549 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TBC1D3EA0A087X179 549 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TBC1D3KA0A087X1G2 549 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 EXOC1LA0A1B0GW35 172 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TLDC2A0PJX2 215 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TSPAN11A1L157 253 aa10.12□□□□□ -0.79
UPF1-213ENST00000601981 TBC1D3FA6NER0 549 aaPredicted RBP10.12□□□□□ -0.79
UPF1-213ENST00000601981 FAM47DPA6NHR8 397 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms