RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 LCA5Q86VQ0 697 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 WDR75Q8IWA0 830 aaKnown RBP11.76□□□□□ -0.53
VRK3-223ENST00000601341 MPP5Q8N3R9 675 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 OR52K1Q8NGK4 314 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 TADA1Q96BN2 335 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 NUDCD1Q96RS6 583 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 TBL1YQ9BQ87 522 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 TRMT61BQ9BVS5 477 aaKnown RBP11.76□□□□□ -0.53
VRK3-223ENST00000601341 PLA2G2FQ9BZM2 168 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 UBE2ZQ9H832 354 aaPredicted RBP11.76□□□□□ -0.53
VRK3-223ENST00000601341 CASS4Q9NQ75 786 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 HPS4Q9NQG7 708 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.76□□□□□ -0.53
VRK3-223ENST00000601341 BFARQ9NZS9 450 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 SLC27A6Q9Y2P4 619 aa11.76□□□□□ -0.53
VRK3-223ENST00000601341 MYO18AQ92614 2054 aaKnown RBP11.76□□□□□ -0.53
VRK3-223ENST00000601341 A8MUI8 341 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 F8W8V4 182 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 FCHO1O14526 889 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 HGSO14964 777 aaPredicted RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 INSIG1O15503 277 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 USP12O75317 370 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 TULP3O75386 442 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 MMP2P08253 660 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 CISD3P0C7P0 127 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 ESRRAP11474 423 aaPredicted RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 POLR2EP19388 210 aaKnown RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 CR2P20023 1033 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 KCNA5P22460 613 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 ADRA1AP35348 466 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 GP5P40197 560 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 MAGEA12P43365 314 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 NPY2RP49146 381 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 SCNN1BP51168 640 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 RAP1GDS1P52306 607 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 SESN2P58004 480 aaPredicted RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 ECT2LQ008S8 904 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 RUNX3Q13761 415 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 GRM2Q14416 872 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 CHI3L2Q15782 390 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 CCDC153Q494R4 210 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 RALGPS1Q5JS13 557 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 MROH9Q5TGP6 573 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 RANBP10Q6VN20 620 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 ADIPOR2Q86V24 386 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 ETFBKMTQ8IXQ9 262 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 WFIKKN2Q8TEU8 576 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 MYLIPQ8WY64 445 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 MRGPRX2Q96LB1 330 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 CDX2Q99626 313 aaPredicted RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 MIPEPQ99797 713 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 CADM1Q9BY67 442 aaKnown RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 PCMTD2Q9NV79 361 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 ARL8BQ9NVJ2 186 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 DEC1Q9P2X7 70 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 HS3ST2Q9Y278 367 aa11.75□□□□□ -0.53
VRK3-223ENST00000601341 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
VRK3-223ENST00000601341 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 OTOL1A6NHN0 477 aaPredicted RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 K7ERQ8 282 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 USP1O94782 785 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 EPOP01588 193 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 GDI1P31150 447 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 OLIG2Q13516 323 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 CCDC85BQ15834 202 aaPredicted RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 PCSK7Q16549 785 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 ACCSLQ4AC99 568 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 DNAL1Q4LDG9 190 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 MBLAC2Q68D91 279 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 TMEM135Q86UB9 458 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 TEX9Q8N6V9 391 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 STON2Q8WXE9 905 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 N4BP2L2Q92802 583 aaPredicted RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 MCUR1Q96AQ8 359 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 EXOC2Q96KP1 924 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 APOL2Q9BQE5 337 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 SLC13A1Q9BZW2 595 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 IL22Q9GZX6 179 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 DENND2DQ9H6A0 471 aaPredicted RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 ARNT2Q9HBZ2 717 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 PIH1D1Q9NWS0 290 aaKnown RBP11.74□□□□□ -0.53
VRK3-223ENST00000601341 NSMCE4AQ9NXX6 385 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 TAS2R1Q9NYW7 299 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 TXNDC16Q9P2K2 825 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 STOML1Q9UBI4 398 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 LHX3Q9UBR4 397 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 NUMBLQ9Y6R0 609 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 XIRP2A4UGR9 3374 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 GRXCR2A6NFK2 248 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 ANHXE9PGG2 379 aa11.74□□□□□ -0.53
VRK3-223ENST00000601341 TRIM24O15164 1050 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms